| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1211 |
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| Symbol | |
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| ID | 5084495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1252358 |
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| End bp | 1254691 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640482769 |
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| Product | quinoprotein glucose dehydrogenase |
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| Protein accession | YP_001167417 |
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| Protein GI | 146277258 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.471268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.152671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGTCA CGATCACCGC CATCGTCCTC GCCCTGGCGG GCCTGGGCCT CCTGATCCCG
GGGGTGTGGC TCGCCACCCT CGGCGGAAGC TGGTTCTACG CCGCGGCCGG TGCCGTCATG
CTGCTGTCGG CCTGGCAGGT GCATCGGCGC TCGGCCGCCG CCGAATGGAC CTATGGCGCG
CTCATCCTCG GCGCGCTTCT CTGGTCGATC TGGGAGGTCG GATTCGACTG GTGGCAACTG
GTCCCCCGCG GGGGCGTGAT CGCGGTTCTG GGCATCTGGC TCTACCTGCC CTTCATGCGC
CGCCAGCTTC TGACCGAGGA CCACCACCCC GCGCCCGGCC TGCCGCTCGC GCTGCCGCTG
CTGGCGGCGA TCGGGGTGGC GATCTGGTCC TGGACCGGCG ACGAGGCCAG TCGCAAGGGC
GAACTTCCCA CCGAGGTGGT CAGCGCCGAG CCCGATCTCG GGCCGACGGC GCCACCGGGC
GAGTGGCACC AGTATGGCCG CACGCAATAT GGCCAACGGT ATTCGCCGCT CGATCAGATC
AACATCCAGA ATGTCGCCGA ACTCGAGCAG GTCTGGCACT ATCAGACCGG CGACGTGAAG
CTGCCCGAGG ACGTGACCGA AACAACCTAT CAGGTCACGC CGCTCAAGGT GAACAACCGG
CTCTACATCT GCACGCCGCA CAATCTGGCC ATCGCGCTCG ATGCGGCCAC CGGCAAGCAG
GCGTGGCGCT TCGACGCCAA CTCCGGGCTC GAGCCCGACC GCCAGCACCA GACCTGCCGG
GGCGTCACTT ACTGGCGCGA TCCGGGCCGG GAAGAGGGCG AGCTGTGCGC GGCGCGCGTC
TACATGCCGA CGGCCGATGC GCGCCTCATA GCGCTCGACG CCAACTCGGG CGCGCTGTGC
GACTTCTTCG CCGACAACGG GACGCTCCAC CTCGAGCACG GGATGCCCTA CACGCCGGCG
GGCTTCTACT ACTCGACCTC GCCGCCTGTC GCGGTGGGCG GGCGCATCAT CATCGGCGGC
GCGGTCAACG ACAATTTCTC GATCTATTCC CAGTCGGGCG TGATCCGGGC CTTCGACGCC
AACACGGGCG CGCTCCTGTG GAACTGGGAC AGCGGCAATC CCGACAGCAC CGCGCCCATC
GACTGGATGA ACGGCGAGAC CTACACCCCG AACTCGCCGA ACTCCTGGTC CGTGTTCTCG
GTCGATGAAG AGCGCGGTCT CGTCTATATC CCGCTCGGAA ACCAGGTGCC GGACCAGCTC
GGGATGGGGC GGTCGGAGGC GGTCGAGGAA CATGCGTCCT CCGTCGTGGC GCTGGACGTG
GCGACGGGGC AGAAGGCGTG GGTGTTCCAG ACCGTCCATC ATGACCTCTG GGACATGGAT
GTGCCGGCGC AGCCCGTGTT GATCGACCTG GAGATCGAGG GCGAGACGGT GCCCGCGCTT
GTCCAGCCGA CCAAGCAGGG CGACATCTAT GTGCTCAACC GCGAGACGGG CGAGCCGGTG
CTGCCGGTGT CGGAAGAGCC CGCCCCGCAG GAGGGGGGCC TCGACGAGGA GACTCTCGCC
CCCACGCAGC CCGTCTCGTC CCTCAGCTTC GCACCCGATC CGCTGCGCGA ACGGGACATG
TGGGGCATCA CGATCTATGA CCAGCTCGCC TGCCGGATCC AGTATCACCG GCTGAACTAT
CAGGGCCGCT ACACGCCTCC GTCGCTGAAC GGCACGATCG TCTATCCCGG CAATTTCGGA
ACCTTCAACT GGGGCTCGGT CGCGGTCGAT CCCGAGCGGC AGGTCATGTT CGGGATGCCG
ACCTACCTGC CCTTCACCGT CGAACTCGTC CCCGAGGAGG AGATCCCGCC GCCGGGCGCA
AACGAGACCG CCAGCGAGCA GGGTCTCAAC CGCAACGAGG GCGCGCCCTA CGGCGTCATC
ATGGGCCCGT TCCTCGGGCC GCTGCAGGTG CCCTGCTCGG CGCCGCCGTG GGGCTTCGTC
GCGGGGACGG ACCTGCGCAC CGGCGAGATC GCCTACAAGC GCCGCAACGG CACGGTGCGG
GACATGACGC CGCTGCCGCT GCCCTTCAAG GTGGGCGTGC CGGGGATCGG CGGGCCGATC
ATCACCCGGG GCGGCGTGGT CTTCCTCGGC GCGACGGTGG ATGACTATCT GAGGGCCTAT
GACCTGACCA CCGGCGATGA ACTCTGGCGC GCGCGCCTTC CGGCCGGGGG GCAATCCACG
CCCATGACCT ACGAGCAGGA CGGGCGGCAG TATCTCGTCA TTGTGGCCGG CGGTCATGGC
TCGGTGGGCA CGAAGCCGGG GGACCATGTG ATCGCCTACG CCCTTCCCGA CTGA
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| Protein sequence | MTVTITAIVL ALAGLGLLIP GVWLATLGGS WFYAAAGAVM LLSAWQVHRR SAAAEWTYGA
LILGALLWSI WEVGFDWWQL VPRGGVIAVL GIWLYLPFMR RQLLTEDHHP APGLPLALPL
LAAIGVAIWS WTGDEASRKG ELPTEVVSAE PDLGPTAPPG EWHQYGRTQY GQRYSPLDQI
NIQNVAELEQ VWHYQTGDVK LPEDVTETTY QVTPLKVNNR LYICTPHNLA IALDAATGKQ
AWRFDANSGL EPDRQHQTCR GVTYWRDPGR EEGELCAARV YMPTADARLI ALDANSGALC
DFFADNGTLH LEHGMPYTPA GFYYSTSPPV AVGGRIIIGG AVNDNFSIYS QSGVIRAFDA
NTGALLWNWD SGNPDSTAPI DWMNGETYTP NSPNSWSVFS VDEERGLVYI PLGNQVPDQL
GMGRSEAVEE HASSVVALDV ATGQKAWVFQ TVHHDLWDMD VPAQPVLIDL EIEGETVPAL
VQPTKQGDIY VLNRETGEPV LPVSEEPAPQ EGGLDEETLA PTQPVSSLSF APDPLRERDM
WGITIYDQLA CRIQYHRLNY QGRYTPPSLN GTIVYPGNFG TFNWGSVAVD PERQVMFGMP
TYLPFTVELV PEEEIPPPGA NETASEQGLN RNEGAPYGVI MGPFLGPLQV PCSAPPWGFV
AGTDLRTGEI AYKRRNGTVR DMTPLPLPFK VGVPGIGGPI ITRGGVVFLG ATVDDYLRAY
DLTTGDELWR ARLPAGGQST PMTYEQDGRQ YLVIVAGGHG SVGTKPGDHV IAYALPD
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