Gene Rsph17025_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1206 
Symbol 
ID5084490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1247415 
End bp1248500 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content69% 
IMG OID640482764 
ProductABC transporter related 
Protein accessionYP_001167412 
Protein GI146277253 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.723665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGA TCACCCTCTC CAACCTCGCC CACAGCTACC TGCCGAAACC CAGGGGCGAG 
GCCGATTTCG CCCTCAAGGA GATGGACCAT GTCTGGCAGG ACGGGGGCGC CTATGCGCTG
CTCGGCGCCT CGGGCTGCGG CAAGACCACG CTTCTGAACA TCATCTCGGG CCTCCTGCGC
CCGAGCCGCG GCCGCGTGCT CTTTGGCGAG CGCGACGTGA CCGACGCCCC CACCGCCGAG
CGCAACATCG CGCAGGTGTT CCAGTTTCCC GTGGTGTACG ACACGATGAC GGTGCGCGAG
AACCTCGCCT TCCCGCTGCG CAACCGCGGC CGGGATGCGG CCTATGTCGA GGCGCGGGTG
GGCCAGATCG CCCGCATGAT CGGCATGGAA GGCGCGCTCG ACACCCGCGC CCGCGGACTT
ACCGCGGATG CCAAGCAGAA GATCAGCCTC GGCCGGGGCA TGGTGCGCGA GGATGTGAAC
GCGATCCTCT TCGACGAGCC GCTGACGGTG ATCGACCCGC ACATGAAATG GGAGCTGCGC
ACCCAGCTCA AGCGGCTGCA CCGCGAGTTC GGGCACACGA TGATCTATGT CACGCACGAT
CAGACCGAGG CGCTGACCTT CGCCGACAAG GTGGTGGTGA TGCACGAGGG GCGCGTGGTG
CAGACCGGCA CACCGGAAGA GCTGTTCGAG ACGCCGGGCC ACACGTTCGT GGGCTATTTC
ATCGGCTCGC CCGGCATGAA CCTCTTCGAG GCGGAGGTGT CGGGCGACAT GGCCCGCGTC
ATGGGCCATC CTGTCCCGCT GGGCGCGACC TACCCTCCCA CCGGCGGGCG GGTGCAGATC
GGCGTCCGGC CGGAGTTCGT GTCGCTCGCC GACGCGGGCC TGCCGGTCAC GATCCGCCGC
ATCGAGGATG TGGGCCGCCA CCGGATCCTG CGCGGCGAGG TCTTCGGCCA GCCCGTGAAC
CTGCTGCTGC CCGAGGACCG GCCCGCCGCC ACCGGGAGCG CCTTCCTGCA ACTCGCCCCC
GAGAAGATCA ACGTCTATTC CGACGACTGG CGCGTGCAGC CGGTCGGCGC CCGGAGGGCC
GCCTGA
 
Protein sequence
MARITLSNLA HSYLPKPRGE ADFALKEMDH VWQDGGAYAL LGASGCGKTT LLNIISGLLR 
PSRGRVLFGE RDVTDAPTAE RNIAQVFQFP VVYDTMTVRE NLAFPLRNRG RDAAYVEARV
GQIARMIGME GALDTRARGL TADAKQKISL GRGMVREDVN AILFDEPLTV IDPHMKWELR
TQLKRLHREF GHTMIYVTHD QTEALTFADK VVVMHEGRVV QTGTPEELFE TPGHTFVGYF
IGSPGMNLFE AEVSGDMARV MGHPVPLGAT YPPTGGRVQI GVRPEFVSLA DAGLPVTIRR
IEDVGRHRIL RGEVFGQPVN LLLPEDRPAA TGSAFLQLAP EKINVYSDDW RVQPVGARRA
A