| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1204 |
|---|
| Symbol | |
|---|
| ID | 5084488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 1245702 |
|---|
| End bp | 1246505 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640482762 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001167410 |
|---|
| Protein GI | 146277251 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.286919 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.719506 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTC CCGGCTCGGC CCTCGTGATG GTGCTCTATC TGCTGTTCCT GCTGATCCCG
ATCTACTGGC TCGTGAACAT GAGCCTGAAG ACCAACGCCG AGATCACGCG CAGCTTCACC
CTCTGGCCGC ATGACCTGAC GTTCCAGAAC TACCGGACGA TCCTCACCGA TCCGGCCTGG
TACATGGGCT ATGTGAACTC TCTGATCTAT GTGGTGATGA ACACCGCGAT CTCGATCACG
GTGGCCCTGC CCGCGGCCTA TGCCTTCTCG CGCTACCGCT TTCTTGGCGA CAAGCACCTG
TTCTTCTGGC TGCTGACGAA CCGCATGGCG CCGCCCGCGG TCTTCGCGCT GCCCTTCTTC
CAGCTCTATT CCTCGGTCGG CCTCTTCGAC ACCCATATCG CGGTGGCGCT GGCCCATTGC
CTCTTCAACG TGCCGCTGGC GGTCTGGATC CTCGAGGGCT TCATGCGCGG CGTGCCGAAG
GAGATCGACG AGACCGCCTA TATCGACGGC TATTCCTTCC CGCGCTTCTT CGTGAAGATC
TTCATGCCGC TGATCGCGAG CGGAATCGGG GTGGCCGCCT TCTTCTGCTT CATGTTCAGC
TGGGTGGAGC TGCTCCTGTC GCGCACGCTG ACCTCGGTGA ACGCCAAGCC GATTGCCGCC
ACCATGACGC GGACGGTCTC GGCCTCGGGC CTCGACTGGG GCGTGCTGGC GGCGGCCGGA
GTGCTGACGC TGATCCCGGG CGGCCTCGTG ATCTGGTTCG TGAGAAACTA CATCGCCAAG
GGTTTTGCAC TGGGGAGGGT GTGA
|
|---|
| Protein sequence | MKRPGSALVM VLYLLFLLIP IYWLVNMSLK TNAEITRSFT LWPHDLTFQN YRTILTDPAW
YMGYVNSLIY VVMNTAISIT VALPAAYAFS RYRFLGDKHL FFWLLTNRMA PPAVFALPFF
QLYSSVGLFD THIAVALAHC LFNVPLAVWI LEGFMRGVPK EIDETAYIDG YSFPRFFVKI
FMPLIASGIG VAAFFCFMFS WVELLLSRTL TSVNAKPIAA TMTRTVSASG LDWGVLAAAG
VLTLIPGGLV IWFVRNYIAK GFALGRV
|
|---|
| |