Gene Rsph17025_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1187 
Symbol 
ID5084360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1230563 
End bp1231747 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content68% 
IMG OID640482745 
Producthypothetical protein 
Protein accessionYP_001167393 
Protein GI146277234 
COG category[S] Function unknown 
COG ID[COG3825] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.247548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.928492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTGC CCTTCTTCGA GACGCTCCGC AGGACCGGCG TGCCGGTGTC GCTTCGCGAA 
TATCTGAGCT TTCTCGAAGG TATGGCGGCC GGTCTCGTGA CCTACGACGT GACAGGCTTC
TACCATCTCG CCCGCACGGC CATGGTCAAG GACGAGCGCC ACCTCGACCG CTTCGACCGC
GCCTTCGCCG AGAGCTTCCG CGGGCTCGAG ACGATCCCCG TCGAGGCGGT GCTCGAGGCG
GTGAACCTGC CCCGCGAATG GCTGGAGAAA CTGGCGGAGA AGCACCTGAC ACCGGAAGAG
CGGGCCGCGG TCGAGGCGCT CGGCGGCTTC GACAAGCTGA TGGACACGCT GCGCGAGCGC
CTGCGCGAGC AGCAGGGTCG GCATCAGGGC GGCAACAGGT GGATCGGCAC CGCCGGCACG
TCGCCCTTCG GCGCCTACGG CTACAATCCC GAGGGCGTCC GCATCGGCCA GCACGAGAGC
CGCCACCGCC GCGCGGTCAA GGTCTGGGAC AAGCGCGAGT TCCGCAATCT CGACGACACG
GTGGAGCTGG GCACCCGCAA CATCAAGGTG GCGCTCCGGC GCCTGCGCCG CTGGGCGCGC
GAGGGCGCCG CGCAGGAGTT CGACCTCGAC GGCACGATCC GGGCCACGGC CGAGCACGGC
TATCTGGACG TCAAGACCCG GCCCGAGCGG CACAATGCGG TGAAGGTGCT GCTGTTTCTG
GATATCGGCG GCTCGATGGA CGACCATGTG CGGGTGGTGG AAGAGCTGTT CTCGGCCGCC
CGCGCCGAGT TCAAGCATTT CGAGCATTTC TACTTCCACA ACTGCCTCTA TGAGGGCGTG
TGGCGCGACA ACCGCCGCCG CTGGGACGAG CAGACCCCGA CCGAGCAGGT GATCCGCACC
TACGGCCCGG ACTACAAGTG CATCTTCGTG GGCGACGCCT CGATGAGCCC CTACGAGATC
CTGCACCCCG GCGGCGCGAA CGAGCACTGG AACGCCGAGG CCGGCGAGGT CTGGTTGCGC
CGCGCGCGGG CGCAATGGCC CTCGAACCTC TGGATCAACC CGGTCCCCGA GCCGCACTGG
GGCTACACCC AGTCGATCCG CATGATCCGC GAGATCTTCG AGGGCCGGAT GGTGCCCATG
ACGCTGGAAG GAATTGCCAG CGGCGTCAAG GAACTCTCGC GCTGA
 
Protein sequence
MFLPFFETLR RTGVPVSLRE YLSFLEGMAA GLVTYDVTGF YHLARTAMVK DERHLDRFDR 
AFAESFRGLE TIPVEAVLEA VNLPREWLEK LAEKHLTPEE RAAVEALGGF DKLMDTLRER
LREQQGRHQG GNRWIGTAGT SPFGAYGYNP EGVRIGQHES RHRRAVKVWD KREFRNLDDT
VELGTRNIKV ALRRLRRWAR EGAAQEFDLD GTIRATAEHG YLDVKTRPER HNAVKVLLFL
DIGGSMDDHV RVVEELFSAA RAEFKHFEHF YFHNCLYEGV WRDNRRRWDE QTPTEQVIRT
YGPDYKCIFV GDASMSPYEI LHPGGANEHW NAEAGEVWLR RARAQWPSNL WINPVPEPHW
GYTQSIRMIR EIFEGRMVPM TLEGIASGVK ELSR