| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1174 |
|---|
| Symbol | |
|---|
| ID | 5084347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 1217751 |
|---|
| End bp | 1218665 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640482732 |
|---|
| Product | CaCA family Na(+)/Ca(+) antiporter |
|---|
| Protein accession | YP_001167380 |
|---|
| Protein GI | 146277221 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0530] Ca2+/Na+ antiporter |
|---|
| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein
[TIGR00378] calcium/proton exchanger (cax) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTCTATA TCCTGTTTGT CCTGGGCCTG CTGGGCCTCT TCTTTGGTGG CGAATATCTT
GTCAGGGGGG CGGCGAATGT GGCCCGGGCT TACCGGATCA GCCCCATGGT GATCGGCCTG
ACGATCGTGG GCTTTGGCAC CTCGACCCCG GAACTGCTCG TGTCGCTGAA CGCCGCGCTG
AACGGCGCCC CGGCCATTGC GGTCGGCAAC GTCCTGGGCT CGAACATCGC GAACGTCCTG
CTGATCCTGG GGGTGACGGC GCTGGTCTAT CCGGTGATGA TCGACGCCCG CCGCATCTGG
CGGGATCTGA CCTTCATGAT CCTGGGGGTG GCGCTCCTGT GGCTCATGCT GCTCGGAGAC
GGGCTCTCGC GGATCGAATC CGTCGTGCTT GTGGCGGCGC TGGCGGGCTT CCTCCTCTCA
TCCTTCCTGA ACGGCAAGGA AGAGGAAGAG GTCGATCCCG AGGGGCTGAT GCCGGTCTGG
AAAGCCGCGC TGATCACGCT CGGGGGCCTC GTGGTGCTGA TGGTGGGGGC GCGGCTGCTG
GTGGACAGCT CGACCCAGAT CGCGCGCTCG TTCGGGATCT CCGAGGCGGT GATCGGCCTC
ACCGTCGTCG CGGTCGGCAC CTCGCTGCCC GAGCTGGCCA CTTCGGTCAT CGCGGCCTGG
CGGCGGCATT CCGAAATCGC GGTCGGCAAC GTCATCGGCT CGAACATCTT CAACGTGCTG
GGCATCCTGG GCATCACCGG CCTCGTGCTG CCGATCACCG ACATCGACCC GCGCTTCCTG
CGCGAGGACA TGCCGTGGGT GATGGGGACG GGCCTGCTTC TGGTGCTGTT CGCTGCCGTG
CTGAAGGGCG TGCCGCGCTG GGCCGGCGGG GTGCTTCTGG CCGCCTACGC CCTGTATGTG
GCGCTGATGA TCTGA
|
|---|
| Protein sequence | MVYILFVLGL LGLFFGGEYL VRGAANVARA YRISPMVIGL TIVGFGTSTP ELLVSLNAAL
NGAPAIAVGN VLGSNIANVL LILGVTALVY PVMIDARRIW RDLTFMILGV ALLWLMLLGD
GLSRIESVVL VAALAGFLLS SFLNGKEEEE VDPEGLMPVW KAALITLGGL VVLMVGARLL
VDSSTQIARS FGISEAVIGL TVVAVGTSLP ELATSVIAAW RRHSEIAVGN VIGSNIFNVL
GILGITGLVL PITDIDPRFL REDMPWVMGT GLLLVLFAAV LKGVPRWAGG VLLAAYALYV
ALMI
|
|---|
| |