Gene Rsph17025_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1171 
Symbol 
ID5084344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1214238 
End bp1215014 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content71% 
IMG OID640482729 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001167377 
Protein GI146277218 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.372212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.332854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACC GGACAATCAG GGTCGAGGAG CGCGTGGGCA TCGCGCAGAT CACGCTCGCG 
CGGCCCGAGG TGATGAACGC GCTCTCGAGC CGGATGCGCG AGGAACTGCT CCATGCCGTT
ACCGAAGCCG CGCCCCGCGC GCGGGTCCTC GTGCTGACGG GCGAGGGGCG GGGCTTCTGC
TCGGGGCAGG ATCTGGGCGA CGCACGCGGG CTCGAGATCC CCGACTTCGA GCGCATCCTG
CGCGAGGAGT ACGAGCCGCT GCTGCGGGCC ATCGCCGACT GCCCGGTGCC GACCCTCGCC
GCTGTGAACG GAGTGGCGGC CGGAGCCGGG GCCAACCTCG CGCTCGCCTG CGACGTGGTG
ATCGCCGCCG AGAGCGCGCG CTTCATCCAG GCCTTCACGC GGATCGGCCT GATCCCGGAC
GCGGGCGGAA CCTGGACATT GCCGCGCCAG ATCGGCCTTG CACGCGCGAT GGGGGCCGCG
CTCTTCGCCG ATGCGATTCC CGCCACCGAG GCCGCCCGCT GGGGCATGAT CTACGAAGCC
GTGCCCGATG AAACCTTCGA GGCCCATTGG CAGGCACGCG CCACCCACCT GGCCGAGGGT
CCGACCAGGG CCTATGGGGC GTTGAAACAG GCGCTGCGCG CGAGCTTCGG CAACGGGTTC
GAAGAGCAGC TCGCGCTCGA GGCGCGGCTT CAGGGCGGCT GCGGCGCCTC GGCGGACTTC
CTCGAAGGGG TGACGGCCTT TCTGGAAAAG CGCCCGGCCC GCTTCACCGG CCGCTGA
 
Protein sequence
MDYRTIRVEE RVGIAQITLA RPEVMNALSS RMREELLHAV TEAAPRARVL VLTGEGRGFC 
SGQDLGDARG LEIPDFERIL REEYEPLLRA IADCPVPTLA AVNGVAAGAG ANLALACDVV
IAAESARFIQ AFTRIGLIPD AGGTWTLPRQ IGLARAMGAA LFADAIPATE AARWGMIYEA
VPDETFEAHW QARATHLAEG PTRAYGALKQ ALRASFGNGF EEQLALEARL QGGCGASADF
LEGVTAFLEK RPARFTGR