| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1165 |
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| Symbol | |
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| ID | 5084338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1206013 |
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| End bp | 1207347 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640482723 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_001167371 |
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| Protein GI | 146277212 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0510605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.555417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCA GCCTGCACAT CGTGGGGGCC GGCATGGCCG GCTCCGAGGC CGCATGGCAG
GCCGCAGAGA TGGGCGTGCC TGTCGTGCTG CACGAGATGC GGCCACGGGT CGGCACCTTC
GCCCACCGCA CCGGCCAGTT CGCCGAGATG GTCTGCTCGA ACTCGTTCCG CTCGGACGAT
GACGAGAGAA ACGCCGTGGG GCTTCTCCAC TGGGAGATGC GCGCGGCCCG CGGGCTCATC
ATGGAGATGG CCTCGGCCCA CCGGCTTCCC GCTGGCGGCG CGCTGGCGGT GGACCGCGAT
CCGTTCGCGG AAAGCGTGAC GGCGCGGCTG CGAGAGCATC CGCTGATTTC CGTTGTGGAC
GAAGAGCTTG CGGAACTTCC CTCAGATGGT GACTGGATCA TCGCGACCGG GCCGCTGACC
TCATCGAGCC TTGCCGAGAG CATCCGCGCC GTCACAGGCG CGCAGTCGCT GGCCTTCTTC
GACGCCATCG CGCCCATCGT CTATGCCGAG AGCATCGACA TGTCGGTTGC CTGGCGGCAA
TCCCGCTACG ACAAGGGCGA GACCGAGGAC GAGCGCACCG CCTACATCAA CTGCCCCATG
ACCCGCGATC AGTATGAAGC CTTCATCGAT GCCCTTCTGG CCGCGGAGAA GACCGAGTTC
CACGAGGGTG AAACGGCCGG CTATTTCGAC GGTTGCCTTC CCATCGAGGT CATGGCCGAG
CGCGGGCGCG AGACGCTGCG CCACGGGCCG ATGAAGCCCG TCGGGCTGAC CAACGCCCAC
AAGCCGCAGG ACAAGGCCCA TGCTGTTGTC CAGCTCCGGC GCGACAACAA GCTCGGCACG
CTCTACAACA TCGTGGGCTT CCAGACCAAG ATGAAGTATG GCGCGCAAAC GTCTGTTTTC
CGTATGATTC CTGGCCTGGA GAATGCGAGC TTTGCACGTC TCGGCGGCAT TCACCGCAAC
ACCTTCCTGA ACTCGCCAAC GCTGCTCGAT GACCGGATGC GGCTGAAGTT GAGACCGAAC
ATTCGCTTCG CCGGGCAAGT AACCGGCGTG GAAGGATATG TCGAGAGTGC GGCCATGGGC
CTTCTGGCGG GGCGGATGGC TGCGGCCGAG ATCCTCGGCC GCGATCTGCC GCCGCCGCCG
CCCGAGACGG CGATGGGCGC GCTGATCACC CACATCACCG GCGGCGCCGA AGCGAAGACC
TTCCAGCCCA TGAACGTGAA CTTCGGGCTC TTTCCTCCGA TCGACGCCCG GGGCGGCCGC
CGCGGCCGCA AGGACCGCTA CAAGGCCTAT ACCCACCGCG CCAAGGCGGC TTTCACCGAA
TGGCTGGCCG CGTAA
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| Protein sequence | MTRSLHIVGA GMAGSEAAWQ AAEMGVPVVL HEMRPRVGTF AHRTGQFAEM VCSNSFRSDD
DERNAVGLLH WEMRAARGLI MEMASAHRLP AGGALAVDRD PFAESVTARL REHPLISVVD
EELAELPSDG DWIIATGPLT SSSLAESIRA VTGAQSLAFF DAIAPIVYAE SIDMSVAWRQ
SRYDKGETED ERTAYINCPM TRDQYEAFID ALLAAEKTEF HEGETAGYFD GCLPIEVMAE
RGRETLRHGP MKPVGLTNAH KPQDKAHAVV QLRRDNKLGT LYNIVGFQTK MKYGAQTSVF
RMIPGLENAS FARLGGIHRN TFLNSPTLLD DRMRLKLRPN IRFAGQVTGV EGYVESAAMG
LLAGRMAAAE ILGRDLPPPP PETAMGALIT HITGGAEAKT FQPMNVNFGL FPPIDARGGR
RGRKDRYKAY THRAKAAFTE WLAA
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