| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1154 |
|---|
| Symbol | |
|---|
| ID | 5084327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 1190076 |
|---|
| End bp | 1191203 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640482712 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001167360 |
|---|
| Protein GI | 146277201 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.504084 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAAGC GCCTCATCAT CGCCGTGGTC CTTCTTGCCG TGATCGTGGG CGGGATCGTC
GGCTTCAACC GCTTCCGCGA CCAGATGATC GTGGATTTCT TCGCCAACCG CACGCCGGCC
CCCGTCACCG TATCCACCTC GGTGGCCGAG CCCATCACCT GGCGCCCGGG GATCGAGGCC
ATTGGCACCG CCATCGCGGC GCAGGGCGTG GATCTTGCGG TGGAGGCGGG CGGCACCGTG
CGCGAGATCC TGTTCCGCGC GAACGAGCAA GTGGAAGAGG GCCAGAAGCT CCTCCAGATT
TCGGAGCGCG AGGAGCGGGC CGACCTTGCC GCGGCCGAAG CCGCGCTGGA ACTGGCAGAG
ACCGAGCTTG AACGCGCGCG CGCCCTGCAG GAGCGGGGCG TGTCGGCGGT GAACAATCTC
GACACGGCGC AGGCGCAGGC CGCCTCGGCG CGGGCGCAGG TGGCCAAGAT CCGGGCGCAG
ATGCAGCAGA AGGAGCTGGT GGCGCCGTTC AACGGTGTGA TCGGCATCCC GCAGGTGGAT
GTCGGCGGCT ATGTGACACC GGGCACGATC TACGCCACGC TGCAGGACCT CGATGCGATG
CGCGTCGATT TCGCCCTGCC CGAGCAGCAG ATCGGCCGCA TCAAGTCCGG CCTTCCGGTC
AGCGTGGTCT CGGAGGCGGG CGGCTACAGC GCACGCGGCG AGATCACCGG CATCGAGCCG
AAGGTCGATC CCAACTCGCG GCTGGTGACG GTGCGGGCCG AGGTCGCCAA CGAGACGGGC
CGGATCTATC CCGGCCAGTT CCTGCGCGTC CGCGTCGAGC TGCCTGACGA GGAGCAGGTG
ATCGCCCTGC CGCAGACCGC GCTGATGACG AGCCTCTATG GCGATTCTGT CTATGTCGTG
CGCGCGGGCG AGGGAGACGC GCCCCGCACC GTCGAGCAGG TCTTCGTTCA GCCCGGCCGC
CGCGACGGCC AGATGATCGA GATCGTCTCG GGGCTCGAGC CGGGGGACGA GGTGGTCAAC
GCGGGCCAGA ACCGTCTGTC CGGCGGGGCG CCGGTGACGG TGGACAACAC CGTGCAGCCG
ATGGCGCAGG CCCGCGCCCA GGCTCCGGCC CAGACCGAGT CCGAGTGA
|
|---|
| Protein sequence | MVKRLIIAVV LLAVIVGGIV GFNRFRDQMI VDFFANRTPA PVTVSTSVAE PITWRPGIEA
IGTAIAAQGV DLAVEAGGTV REILFRANEQ VEEGQKLLQI SEREERADLA AAEAALELAE
TELERARALQ ERGVSAVNNL DTAQAQAASA RAQVAKIRAQ MQQKELVAPF NGVIGIPQVD
VGGYVTPGTI YATLQDLDAM RVDFALPEQQ IGRIKSGLPV SVVSEAGGYS ARGEITGIEP
KVDPNSRLVT VRAEVANETG RIYPGQFLRV RVELPDEEQV IALPQTALMT SLYGDSVYVV
RAGEGDAPRT VEQVFVQPGR RDGQMIEIVS GLEPGDEVVN AGQNRLSGGA PVTVDNTVQP
MAQARAQAPA QTESE
|
|---|
| |