| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1133 |
|---|
| Symbol | |
|---|
| ID | 5084565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 1161381 |
|---|
| End bp | 1163558 |
|---|
| Gene Length | 2178 bp |
|---|
| Protein Length | 725 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640482691 |
|---|
| Product | glycogen branching enzyme |
|---|
| Protein accession | YP_001167339 |
|---|
| Protein GI | 146277180 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAT CCCCTGAGAC GCTTGTCGAT CCCACCGTCG CACAAGCCAT CGTCGAGGGG
GCGCATGGCG ATCCCTTCTC GGTTCTGGGG CTGCACCGGC GGGGGGAGGG CCATGTGCTC
ACCGCCTTCG TGCCGGGCGC CGATCGCCTC ACCGTCCTCG CCTCGCGCGA GATCGAGGCC
GAAGGGGTGG CGGGCTTCCC CGGCCTCTTT GCCGTTCGGA TGGGGTGCGA GCCCTACCGG
CTGCGCGCCG AGGGGCATGG CGCGGTCTGG GAGTTCGAGG ATCCGTTCCG CTTCGGCCCG
GTGCTGGGCG AGCTGGACGA GTATCTTCTG GGCGAGGGCA CGCACCGGCG GCTCTGGCAG
GTGCTGGGGG CCCACCCGAT CCACCACGAG GGGGTCGAGG GCACCCATTT CGCCGTCTGG
GCGCCCAATG CGCAGCGCGT CTCGGTGGTG GGCGACTTCA ACATCTGGGA TGGCCGCCGC
CACCCGATGC GCCGCCGCGG ACCCACCGGC GTCTGGGAGA CCTTCCTGCC CGGAGTGGGC
GAGGGTGCGG CCTACAAATA CGAGATCCGG GGACCGGGGG GCGAGCTTCT GCCGCTGAAG
GCCGATCCGG TGGGCTTCGG ATCCGAACAT CCGCCGCGCA CGGCCTCGGT GGTCCGTGCG
CTGGGACAGC GCGACTGGCA GGACGCGGAC TGGATGGCCA CGCGGGCCGC GCGCCATTCG
GTCGAGGCGC CGATCTCGAT CTACGAGGTC CATCTCGGCA GCTGGAAGCG CGGCGAGGGC
GGGCGGATGC TCTCCTACAC CGAGCTTGCG CGCGATCTGG TGGATTATGC GGCCGACATG
GGCTTCACCC ATATCGAGCT GATGCCGATC AGCGAGCATC CGTTCGACGG CTCGTGGGGC
TACCAGCCGG TGGGGCTCTT TGCCCCAACC ATCCGCCACG GCACGCCGGA CGGGTTCCGC
GCGCTGGTGG AGGCCGCCCA TGCGAAGGGG CTGGGCGTGC TGATCGACTG GGTGCCGGGC
CATTTCCCGA CCGATGCGCA TGGGCTCGGG CGCTTCGACG GGACGCCGCT CTACGAGCAC
GCCGACCCGC GCGAGGGCTT CCATCAGGAC TGGAACACGC TGATCTACAA CTTTGGCCGG
ATCGAGGTGG CGAACTGGCT GACCTCGAAC GCGCTCTACT GGCTTGAGGA CTATCACATC
GACGGGCTGC GCGTGGATGC GGTGGCCTCG ATGCTTTACC GCGACTATTC GCGCAAGGCG
GGCGAATGGG TGCCGAACCG CGACGGCGGG CGCGAGAATT ACGAGGCCAT CGACCTTTTG
CGCCGCGTCA ACGCCACCGT CTATGGCGAG GATGCGGGCG TGATGACGGT GGCCGAGGAG
AGCACGGCCT TCCCCGGCGT CTCTCGGCCC GTGGATCAGG GCGGGCTCGG CTTCGGCTTC
AAGTGGAACA TGGGCTGGAT GAACGACACG CTCGACTACA TGTCGCGCGA CCCGGTGCAT
CGGCGGCACC ATCACCACCA GATGACCTTC AGCCTGCATT ACGCCTGGTC CGAGAATTAC
ATCCTGCCGA TCAGCCACGA CGAGGTGGTG CATGGCAAGG GCTCGATGAT CGCGAAGATG
CCGGGCGAGG GGGCCGAGAA GTTCGCCAAC CTGCGCGCCT ACTACGGCTA CATGTGGACG
CACCCGGGCA AGAAGCTGCT GTTCATGGGC TGCGAGTTCG CGCAGGGGCG CGAGTGGAAC
CACGCCGCCG AACTCGAGTG GCAGCAGCTT GACCATCCGC TGCACCGGGG CGTGCAAAGC
CTCGTGCGCG ATCTGAACCG GCTCTATCGC ACGACACCGG CGCTCCACCG CAACGACGCG
CGGCCCGAGG GGTTCGTCTG GCTGGAGGCC AATGACTCGG ACCATTCCCT CTATGCCTTC
ATCCGGCGGG GCCGGGTGGA TGAGCCGATG GTGGTGGCTG CGATGAACTT CACCCCCGTT
GTACGGCGGA TCCGCCTCGG GCTTCCGGCC GAGGGTCAGT GGGATGAAGT ACTCAACACC
GATGCCGAAA TCTACGGCGG CGGGAACCGG GGCAATCTGG GCGGCGTCCT GTCCGAGCCT
GTGCGCTGGC ATGGGCAGGA ACATTCGGCC CTTGTCACGC TGCCGCCGCT GTCTACGGTA
ATCTTCCGGC AGGGCTGA
|
|---|
| Protein sequence | MAKSPETLVD PTVAQAIVEG AHGDPFSVLG LHRRGEGHVL TAFVPGADRL TVLASREIEA
EGVAGFPGLF AVRMGCEPYR LRAEGHGAVW EFEDPFRFGP VLGELDEYLL GEGTHRRLWQ
VLGAHPIHHE GVEGTHFAVW APNAQRVSVV GDFNIWDGRR HPMRRRGPTG VWETFLPGVG
EGAAYKYEIR GPGGELLPLK ADPVGFGSEH PPRTASVVRA LGQRDWQDAD WMATRAARHS
VEAPISIYEV HLGSWKRGEG GRMLSYTELA RDLVDYAADM GFTHIELMPI SEHPFDGSWG
YQPVGLFAPT IRHGTPDGFR ALVEAAHAKG LGVLIDWVPG HFPTDAHGLG RFDGTPLYEH
ADPREGFHQD WNTLIYNFGR IEVANWLTSN ALYWLEDYHI DGLRVDAVAS MLYRDYSRKA
GEWVPNRDGG RENYEAIDLL RRVNATVYGE DAGVMTVAEE STAFPGVSRP VDQGGLGFGF
KWNMGWMNDT LDYMSRDPVH RRHHHHQMTF SLHYAWSENY ILPISHDEVV HGKGSMIAKM
PGEGAEKFAN LRAYYGYMWT HPGKKLLFMG CEFAQGREWN HAAELEWQQL DHPLHRGVQS
LVRDLNRLYR TTPALHRNDA RPEGFVWLEA NDSDHSLYAF IRRGRVDEPM VVAAMNFTPV
VRRIRLGLPA EGQWDEVLNT DAEIYGGGNR GNLGGVLSEP VRWHGQEHSA LVTLPPLSTV
IFRQG
|
|---|
| |