Gene Rsph17025_1129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1129 
Symbol 
ID5084561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1155048 
End bp1157570 
Gene Length2523 bp 
Protein Length840 aa 
Translation table11 
GC content73% 
IMG OID640482687 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_001167335 
Protein GI146277176 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase
[COG2608] Copper chaperone 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.979362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCG GCAGAAACTT TGCCCGGCCT CTTGACCTTC CAGCTGTGGG AAGGCCCATC 
TTCGGCCCGA AGGAGATTGC CATGACCGTC CACCAGCCGC ACGCCACCGG CCTGAAAAGC
CTGCGCCTGC ACCTCGAGGG GATGAGCTGC GCCTCGTGCG TGGCGCGGGC CGAGCGGGTT
CTGGCCGCCG TGCCCGGCGT TGCCGAGGCC CGCGTGAGCC TGGCCGACGA AAGCGCGGAC
ATCCGCTATG GCGGGCCCGC GACGGCCGAG GCTCTGGCCG AGGCACTCGG GCGGGCGGGC
TATCCGGCGC GGCGGGAAAA GCTGGTGCTG TCGGTCGAGG GGATGACCTG CGCCTCCTGC
ACCGGTCGGG TCGAGCGGGT GCTGAAGGCC CAGCCGGGCG TGATCGATGC CAGCGCCAAC
CTCGCGAACC GGCGGGCGCA GGTCACCCTC TGGGAGGGCG CCTCGACGGC CGCGGCGCTG
GCGCAGGCGG TGACACGGGC GGGCTTTGCC GCGGCTCCGA TGCGGGCCGA GGCGCCGGAC
CGGCGGGCCG AGGATCTGCG GGGCCTGCGC CGCGACGCGT GGATCGCGGG CCTGCTCGCC
TTGCCGGTGT TCCTGGTCGA GATGGGCGGG CACCTGATCC CGGCGCTGCA CCACTGGGTC
GCCCACACGA TCGGCACGCA GACCTCGTGG ATCGCGCAGT TCCTGCTCAC GAGCCTCATC
CTGGCAGGGC CGGGGCGGCG GTTCTTCGTC AAGGGCGTGC CGGCTCTGGT GCGAGGGGCG
CCGGACATGA ACAGCCTCGT GTCGGTGGGC ACCTTTGCGG CCTGGGCCTT CTCGACCGTG
GCGACCTTCG CGCCGGGCCT TCTGCCCGAG GGCTCGCGCG CGGTCTATTT CGAGGCGGCC
TCGGTGATCG TGGTCCTGAT CCTGATCGGG CGCCTGATGG AGGCGCGGGC GCGCGGGCAG
GCGGGGGCGG CCATCGCGGG CCTGATCCGG CTGCAGCCCC GCACCGCCCG CCTCAGTCGC
GACGGGATCG AGACCGAGGT GCCGATCGAG ACCATCACGC CCGGCGCCAT CCTCCACATC
CGGCCGGGCG AGCGCATCCC GCTCGACGGG GTGGTGGTCT CGGGCCAGAG CGCGGTGGAT
GAGGCGATGC TGACCGGCGA GGCCCTGCCG GCGGCCAAGG CCGAAGGGGA CGAGGTGACG
GGCGGGACCG TCAATGGTAC CGGCGCGCTG GCCATGCAGG CGACGCGCGT CGGCGCGGAT
ACGGTGCTGG CGCGGATCGT GGCCATGGTC GAGGAGGCGC AGGGCGCCAA GCTGCCGGTT
CAGGCGCTGG TGGACCGGAT CACCCTGCGC TTCGTGCCGG TGGTCATGGC TGTGGCGGCC
CTGACCGTGC TGGTCTGGCT GGTGCTGGGG CCGGGACTGG GCGAGGCGCT GGTGGCGGGC
GTGTCGGTTC TGATCATCGC CTGCCCCTGC GCGATGGGCC TTGCCACGCC GGTCTCGATC
ATGGTGGGCA CGGGGCGCGC GGCCGAGATG GGCGTGCTCT TCCGCAAGGG CGAGGCGCTG
CAGCGGCTGT CCGAGATCGA GCGCGTGGGC TTCGACAAGA CCGGCACGCT GACCGAAGGA
CGGCCGCAGG TGACGGATGT CCTGCCCGCC GAGGGCCGTG AGACGCAGGA GTTGCTGCGC
CTTGCCGCCG CCGTCGAGGC GCGCTCCGAG CATCCGCTGG CGGGGGCGAT CCTGCGCGCC
GCCGAGGCGC TCGATCGGCC CGAGGCCCAG GGTTTTGCCG CCACGCCCGG ACATGGGGCC
GAGGCGATGG TGGGCGGGCA GCGCGTGCGG GTGGGCAGCG CCCGCATGAT GGAGGGGCTT
GATCCCGGGC CGCTTGCGGG CGCGGCCTCG CGGCTCGAGG CCGAGGGGCG GACGCCGGTC
TGGGTTGCGG TCGAGGGGCG CATCGCGGGC GTGATCGGCG TGGCCGACCG GGTGAAGCCC
ACATCGCGCG CCGCGGTGGC CGAACTCGCG CGCATGGGCC TGCCTTCGGC CATGGTCACG
GGCGACGCGC CCGGTGTCGC GCGCGCCATC GGGCAGGAGA TCGGGATTGA CGACATCCAT
GCCGGCATCC TGCCGGGCGG CAAGTTTGCG GAAGTTACGA AGATGGGCCG CGCGGCCTTC
GTGGGCGACG GGATCAACGA CGCGCCCGCC CTTGCGGCGG CCGACGTCGG CATCGCCATC
GGCACCGGGA CGGATGTGGC GATCGAGGCG GCGGATGTGG TGCTGATGTC GGGCGATCCG
CTGGGCGTGG CGAACGCCGT GGCCCTCAGC CGCCGGACGA TGCGCAACAT CCGCCAGAAC
CTCGTCTGGG CCTTTGGCTA CAATGTGGCG CTGATCCCGG TGGCGGCGGG GGTGCTGGTG
CCCTTCGGCG GCCCGCAGCT CTCGCCGATG CTGGCGGCCG GGGCGATGGC CTTCTCGTCG
GTCTTCGTGC TGACCAACGC CCTGCGCCTG CGCCGGGCGC CGGCGGTGGG GGCGCGGCCA
TGA
 
Protein sequence
MAGGRNFARP LDLPAVGRPI FGPKEIAMTV HQPHATGLKS LRLHLEGMSC ASCVARAERV 
LAAVPGVAEA RVSLADESAD IRYGGPATAE ALAEALGRAG YPARREKLVL SVEGMTCASC
TGRVERVLKA QPGVIDASAN LANRRAQVTL WEGASTAAAL AQAVTRAGFA AAPMRAEAPD
RRAEDLRGLR RDAWIAGLLA LPVFLVEMGG HLIPALHHWV AHTIGTQTSW IAQFLLTSLI
LAGPGRRFFV KGVPALVRGA PDMNSLVSVG TFAAWAFSTV ATFAPGLLPE GSRAVYFEAA
SVIVVLILIG RLMEARARGQ AGAAIAGLIR LQPRTARLSR DGIETEVPIE TITPGAILHI
RPGERIPLDG VVVSGQSAVD EAMLTGEALP AAKAEGDEVT GGTVNGTGAL AMQATRVGAD
TVLARIVAMV EEAQGAKLPV QALVDRITLR FVPVVMAVAA LTVLVWLVLG PGLGEALVAG
VSVLIIACPC AMGLATPVSI MVGTGRAAEM GVLFRKGEAL QRLSEIERVG FDKTGTLTEG
RPQVTDVLPA EGRETQELLR LAAAVEARSE HPLAGAILRA AEALDRPEAQ GFAATPGHGA
EAMVGGQRVR VGSARMMEGL DPGPLAGAAS RLEAEGRTPV WVAVEGRIAG VIGVADRVKP
TSRAAVAELA RMGLPSAMVT GDAPGVARAI GQEIGIDDIH AGILPGGKFA EVTKMGRAAF
VGDGINDAPA LAAADVGIAI GTGTDVAIEA ADVVLMSGDP LGVANAVALS RRTMRNIRQN
LVWAFGYNVA LIPVAAGVLV PFGGPQLSPM LAAGAMAFSS VFVLTNALRL RRAPAVGARP