Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1121 |
Symbol | |
ID | 5084553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1146971 |
End bp | 1148101 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640482679 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_001167327 |
Protein GI | 146277168 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.182226 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTAGAT TCGACAGATA TCTCCTGTCG CAACTGGTGG CGCTGTTCGG CTTCTTCTCG CTCGTGCTGG TGCTGGTCTA CTGGATCAAC CGCGCGGTGG GCCTGTTCGA CGACCTGATC TCTGACGGCC AGTCGGCGCT TGTCTTTCTC GAATTCTCGC TGCTTGCCCT GCCGAACGTG ATCCGGCTCG TTCTGCCGCT CTCGGCCTTT GCCGCCACGA TCTACATCGT GAACCGCCTC AGTCAGGAAT CCGAGCTGGT GGTGATGCAG GCCACGGGAT TTTCCGCCTT CCGCCTCGCG CGTCCGGTGA TCTTGTTCGG CCTGATCGTG GCGATGATGA TGATCGTCCT GATGAACCTG CTCGTTCCGG CAAGCCGGGC CACCCTCTCC GCCCGCTCGG CCGAAATTTC CGAGAATGCG ACCGCCCGTT TCCTGCGCGA CGGCGAATTC CTGCACCCCG TCCGGGGCGT GACGCTCTAT ATCCGCGAGA TTTCCGAGAC GGGCGAGCTG AACGACCTCC TGCTCGTGGA CGACCGCGAC CGCGCGCGTT CGACGATCTA CACGGCGCGC CGGGCGCTTC TGGTGCGGAC CGAGACGACG CCGCGGCTGC TGATGATCGA CGGCAGCGCC CAGACGCTCA CCCGCGAGGG GCGCCGGCTC GAGCTGACCC GATTTGCCGA TGTCACCTAT GACCTCGGCG CCTTCATGAA GAGCGACGGC CCCAAGCGGC GCGTGCTCGA GGAGCTTTCG ACGCCCGACC TGCTCGCGCC GACCGAGGCG CTTCTGGCCG AGACGCGGTC CACCCGCGCT GCGGCCCTCT ACGAGGGGCA CAGCCGGATC GCGCAGCCCT TCCTCGGGCT CGCCTCGTCG CTGATCGGCT TTGCGGCGCT GCTTCTGGGC AGCTTCAGCC GATTTGGCCT GTGGTGGCAG ATCCTCTTTG CAGTCGTGCT GCTGATCGTG GTCCAGACGA TCAATGTGGC GGCCTCGGGC GTCGGCGTGA CGGACGAGGC CCTCTGGCCG CTCGCCTATG CGGCCCCGGT GGTCGGGCTG TTGATCGGGA TCCTGCTCCT TTGGATCGCC CAGCGGCCGC GCCGGCTGCG GCGTGCCCTC ATGGGGGCCT TCGCCTCATG A
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Protein sequence | MSRFDRYLLS QLVALFGFFS LVLVLVYWIN RAVGLFDDLI SDGQSALVFL EFSLLALPNV IRLVLPLSAF AATIYIVNRL SQESELVVMQ ATGFSAFRLA RPVILFGLIV AMMMIVLMNL LVPASRATLS ARSAEISENA TARFLRDGEF LHPVRGVTLY IREISETGEL NDLLLVDDRD RARSTIYTAR RALLVRTETT PRLLMIDGSA QTLTREGRRL ELTRFADVTY DLGAFMKSDG PKRRVLEELS TPDLLAPTEA LLAETRSTRA AALYEGHSRI AQPFLGLASS LIGFAALLLG SFSRFGLWWQ ILFAVVLLIV VQTINVAASG VGVTDEALWP LAYAAPVVGL LIGILLLWIA QRPRRLRRAL MGAFAS
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