| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1117 |
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| Symbol | pdxA |
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| ID | 5084549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1141456 |
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| End bp | 1142424 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640482675 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001167323 |
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| Protein GI | 146277164 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.124858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGCGC CGATCGCCCT CACCTGCGGC GAGCCTGCGG GCATCGGACC CGAGATTGCG
GTCAAGGCGC GCCGGGCGCT TGGCGCGCGC GTGCCCTTCT TCTGGATCGG CGATCCCGCG
CACCTGCCCG AGGGCAGCCT CTGGCAGGGG ATCTCGGCCC CGTTCGAGGC GGCCGATGTG
CCGACCGCGG CCCTGCCGGT GCTGTTCCAC CGCTTTCCCG ATCCGCAGGC CCCGGGCGTT
CCCACGCCGG GCAATGCGGC CGAAGTGGTG GCGGTGATCG CCCGCGCCGT GTCGCTCGTG
CAGTCGGGCG CGGCTTCGGC GGTCTGCACG GCGCCGATCC ACAAGAAGGC GCTGAAGGAC
GGGGCGGGCT TCGCCTTCCC CGGCCATACG GAATATCTCG CGTCGCTGGC CGGCGTCGGA
CAGGTGGTGA TGATGCTGGC CTGTCCGGGC CTGCGGGTGG TGCCGGCGAC GATCCACATT
CCGCTGTCGG ACGTTCCGAA GCAGCTGACG CAGCCCCTGC TCGAGGAGGT GCTGCGGATC
ACGCACGCCG CGCTCGGCCG CGACTTCGGG CTGGACAGGC CGCGGATCTG GGTGACGGGC
CTCAACCCCC ATGCCGGAGA GGGAGGCGCC ATGGGGCGCG AGGATCTTGA CGTGATCGCG
CCCGTTCTGG AGCGGCTTCG CGCCGAGGGG CTGGACCTGA CCGGACCGCT GCCGGCCGAC
ACGATGTTCC ACGCTGGCGC ACGGGCCCGC TACGACTGCG CGGTGGCAAT GTATCACGAC
CAGGCGCTGA TCCCGATCAA GACCATCGAC TTCGCCGGCG GGGTGAACGT GACGCTGGGG
CTGCCCTTCA TCCGCACCTC GCCCGATCAC GGCACGGCCT TCGACATCGC GGGCCGCGGG
GTGGCCGACC CGTCGAGCCT GGTGGCGGCG CTGGAGATGG CGGCCACGAT GGCGCGGGCG
CGGCGCTGA
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| Protein sequence | MIAPIALTCG EPAGIGPEIA VKARRALGAR VPFFWIGDPA HLPEGSLWQG ISAPFEAADV
PTAALPVLFH RFPDPQAPGV PTPGNAAEVV AVIARAVSLV QSGAASAVCT APIHKKALKD
GAGFAFPGHT EYLASLAGVG QVVMMLACPG LRVVPATIHI PLSDVPKQLT QPLLEEVLRI
THAALGRDFG LDRPRIWVTG LNPHAGEGGA MGREDLDVIA PVLERLRAEG LDLTGPLPAD
TMFHAGARAR YDCAVAMYHD QALIPIKTID FAGGVNVTLG LPFIRTSPDH GTAFDIAGRG
VADPSSLVAA LEMAATMARA RR
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