| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1116 |
|---|
| Symbol | ksgA |
|---|
| ID | 5084548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 1140542 |
|---|
| End bp | 1141378 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640482674 |
|---|
| Product | dimethyladenosine transferase |
|---|
| Protein accession | YP_001167322 |
|---|
| Protein GI | 146277163 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0735586 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCGCGA TTGACGGGCT GCCGCCCCTG CGCGAGGTGA TCCGGGCGCA CGGGCTGTCG
GCGAAGAAGC AGCTGGGGCA GAACTTCCTG CTCGACCTGA ACCTGACGGC CAAGATCGCG
CGGCTGGCGG GCGATCTGAA GGGATCGGAC GTACTGGAGG TGGGGCCCGG GCCGGGCGGT
CTCACGCGCG GGTTGCTGGC CGAGGGCGCG CGGCGCGTGC TGGCCATCGA GAAGGATGCG
CGCTGCCTGC CGGCTCTGGC CGAGGTGGCG GCGGCCTGGC CGGGGCGCCT CGAGGTGCTG
AACGCCGATG CGCTCGAGGT GGACGTGGCC GCGCGCCTGA CGCCGCCGAT CCGCATCGTG
GCGAACCTGC CCTACAATGT CGGAACCGAG CTGCTGACGC GCTGGCTCTC GTCGGGCTGG
CCGCCCTTCT GGGAGAGCCT GACGCTGATG TTCCAGAAGG AGGTGGCCGA GCGGATCGTG
GCGCGGCCGG GCTCGAAGGC CTACGGGCGT CTGGCGCTCC TGTCGCAGTG GCGGACCGAG
CCGAAGATCG TGCTGACGCT GCCGCCCGAA GCCTTCACCC CGCCACCGGC CATTCATTCG
GCGGTGGTGC ATTTCACCCG GCTTGCGGGG CCGCGCTATC CGGCCGATGC GGCCGTGCTG
TCGCGGGTGA CGGCCATGGC CTTCAACCAG CGGCGCAAGA TGCTCCGGTC GAGCCTGAAG
GGGTTGGCGC CCGACATCGA GACGGTGCTG CGCGATGCGG GGATCGAGCC CACGCAGCGC
GCGGAAGAGC TGTCACTGGA GGCCTTCTGC GCCCTCGCCC GCCGGGTGGC GGGCTGA
|
|---|
| Protein sequence | MAAIDGLPPL REVIRAHGLS AKKQLGQNFL LDLNLTAKIA RLAGDLKGSD VLEVGPGPGG
LTRGLLAEGA RRVLAIEKDA RCLPALAEVA AAWPGRLEVL NADALEVDVA ARLTPPIRIV
ANLPYNVGTE LLTRWLSSGW PPFWESLTLM FQKEVAERIV ARPGSKAYGR LALLSQWRTE
PKIVLTLPPE AFTPPPAIHS AVVHFTRLAG PRYPADAAVL SRVTAMAFNQ RRKMLRSSLK
GLAPDIETVL RDAGIEPTQR AEELSLEAFC ALARRVAG
|
|---|
| |