Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1108 |
Symbol | |
ID | 5084711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1132653 |
End bp | 1133663 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640482666 |
Product | extracellular solute-binding protein |
Protein accession | YP_001167314 |
Protein GI | 146277155 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.122481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.048242 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCCCG CCATTGCATC TTCCATCGCC CTCGCGCTTT GCACGACCGC GCTGCCTGCC CTGGCCGAGG AGGTGAACAT CTACTCGCAC CGCCAACCCG AGCTGATTCA GCCGCTGGTG GACGCGTTCA GCGCCGAAAC CGGCATCGAT GTGAATGTGG CCTTCGTGGA CAAGGGGATG GCCGAACGGC TGGTGGCCGA GGGCGACCGC TCGCCCGCCG ACCTGGTTCT GACCGTGGAC ATCGCGCGGC TGATGCAGGT GGTGGATGCG GGCGTCACGC AACCCGTCGA GTCCGAGGTG CTGGACGCCA ACATCCCCGA GTCGTTCCGC GATCCCGAGG GCCACTGGTT CGGCCTGACC AGCCGGGCGC GCATCGTCTA TGCCTCGAAG GAGCGCGTGG CCGATGGCGA AGTCACCACC TACGAGGATC TCGCCTCGGA GAAGTGGAAG GGCCGGATCT GCACGCGCTC GTTCACCAAC GACTACAACG TGGCGCTCAC GGGGGCGGTG CTCGCCCACC ACGGCGCCGA GGCCGCGCGG AGCTGGCTCG AGGGCGTGAA GGCCAACCTC GCCAAGAAGC CCGAGGGCGG CGACCGCGAT CAGGTGAAGT CGATCTGGGC GGGCGAGTGC GACATCAGCC TCGGAAACAC CTACTACATG GGCCAGATGG CCAATGATCC CGAACAGAAG GAATGGGCCG ACTCGGTCCG CATCACCTTC CCGACCTTCG AGGGTGGCGG CACGCACATG AACATCTCGG GCGTGGCCAT GACCAGGGCC GCTCCGAACC GCGAGGCGGC GCTGAAGCTG ATGGAATGGC TGACCTCGGA CGAGGCGCAG CGGATCTACG CCGAGACCAA CCACGAATTC CCGGTCAAGG AAGGCGTCGC CCGCTCGGAG CTTGTGCAGA GCTGGGGCGA GTTCACGCCG GACGAGATCG GCCTCGCCGA AGTGGCGGCG CAGCGGGCCG AGGCGCTCAA GCTGATCGAA TCGGTGAACT TCGACGGCTG A
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Protein sequence | MRPAIASSIA LALCTTALPA LAEEVNIYSH RQPELIQPLV DAFSAETGID VNVAFVDKGM AERLVAEGDR SPADLVLTVD IARLMQVVDA GVTQPVESEV LDANIPESFR DPEGHWFGLT SRARIVYASK ERVADGEVTT YEDLASEKWK GRICTRSFTN DYNVALTGAV LAHHGAEAAR SWLEGVKANL AKKPEGGDRD QVKSIWAGEC DISLGNTYYM GQMANDPEQK EWADSVRITF PTFEGGGTHM NISGVAMTRA APNREAALKL MEWLTSDEAQ RIYAETNHEF PVKEGVARSE LVQSWGEFTP DEIGLAEVAA QRAEALKLIE SVNFDG
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