Gene Rsph17025_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1107 
Symbol 
ID5084710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1131614 
End bp1132561 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content69% 
IMG OID640482665 
Productinosine/uridine-preferring nucleoside hydrolase 
Protein accessionYP_001167313 
Protein GI146277154 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.623815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0266851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC CCCGCCGGAT CATCATCGAC ACCGACCCCG GACAGGACGA CGCCGTGGCG 
ATCCTGCTGG CGCTGGCAAG CCCCGAGCTT GAGGTGCTGG GCATCACGGC GGTTGCGGGG
AACGTGCCGC TGCCGCTCAC GCAGAAGAAC GCCCGGATCA TCTGCGAGAT CGCCGGGCGG
ACCGACATTC CGGTCTTTGC CGGCTGCGAC GCGCCGCTCG TGCGCAAGCT GGTGACGGCC
GAGCATGTGC ATGGCAAGAC CGGCCTCGAC GGCCCCGCCC TGCCCGATCC GACCATGCCG
CTTCAGGACC GGCACGCCGT CGATTTCCTG ATCGAGACGC TGCGCACCGA GCCCGAGGGC
AGCGTCACCC TCTGCCCGCT GGGCCCGCTC ACCAACATCG CCACCGCCCT GCAGCGCGCG
CCCGACATCG CGCCGCGCAT CCGCGAGATC GTCCTGATGG GAGGCGCCTA TTTCGAGGTC
GGCAACATCA CTCCCTCGGC CGAGTTCAAC ATCTATGTCG ATCCCGAGGC CGCCGCGATC
GTCTTCGGGG CGGGGGTGCC TCTGGTCGTC ATGCCGCTCG ACGTCACCCA CAAGGCCCTG
ACCAGCCCCG CGCGCGTGCG CCGCTTCCGC GAGATGGGCA CCCGGCCGGG GCGGATGGTG
GCCGAGTGGA CCGACTTCTT CGAGCGGTTC GACCGCGAGA AATACGGGGC GGAGGGCGCG
CCGCTGCACG ATCCCTGCGT GATCGCATGG CTGCTGAACC CCGACCTCTT CCTCGGGCGG
CACATCAATG TCGAGATCGA GACCGAGGGC CGCTTCACGA CCGGCATGAC GGTGGCCGAC
TGGTGGCGGG TCAGCGACCG GGCGCCGAAT GCGCTCTTCA TGCGCGACCT CGACACCGAC
GGGTTCTTCG ACCTCCTTGC CGAGCGGATT GCGCGGCTTC GACCCTGA
 
Protein sequence
MTTPRRIIID TDPGQDDAVA ILLALASPEL EVLGITAVAG NVPLPLTQKN ARIICEIAGR 
TDIPVFAGCD APLVRKLVTA EHVHGKTGLD GPALPDPTMP LQDRHAVDFL IETLRTEPEG
SVTLCPLGPL TNIATALQRA PDIAPRIREI VLMGGAYFEV GNITPSAEFN IYVDPEAAAI
VFGAGVPLVV MPLDVTHKAL TSPARVRRFR EMGTRPGRMV AEWTDFFERF DREKYGAEGA
PLHDPCVIAW LLNPDLFLGR HINVEIETEG RFTTGMTVAD WWRVSDRAPN ALFMRDLDTD
GFFDLLAERI ARLRP