| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1101 |
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| Symbol | |
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| ID | 5084704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1126046 |
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| End bp | 1127416 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640482659 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001167307 |
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| Protein GI | 146277148 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0457175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGGG GCTGGACCAA GACCGACTGG CGCGCCAAGC CGCGCATCCA GATGCCCGAC
TATCCGGAGG CCGCCGCCGT CGAGGCGGTC GAGGCGCAGC TTGCGAAATA TCCGCCCCTC
GTCTTCGCGG GCGAGGCCCG CAAGCTGAAG GCGGCGCTGG CCGAGGCGGC CGAGGGCCGC
GCCTTCCTGC TGCAGGGCGG CGACTGCGCC GAGAGCTTTG CGGAATTCTC GGCCGACAAC
ATCCGCGACA CGTTCCGCGT GCTCCTGCAG ATGGCGGTCG TGCTCACCTA CGGGGCCAAG
GTGCCGGTCG TGAAGATCGG CCGCATGGCG GGGCAGTTCG CCAAGCCGCG CTCGGCCCCG
ACCGAGGTCA TCAACGGGAT GGAGCTGCCG TCCTACCGGG GCGACATCAT CAACGGCTTC
GACCCGAGCC CCGAGTCGCG CATCCCCGAT CCCCGGCGGA TGCTGCAGGC CTACACACAG
GCCGCGGCCT CGCTCAATCT GCTGCGCGCC TTCTCGACGG GCGGCTTCGC CGACATCCAC
CGCGTCCATT CCTGGACGCT GGGCTTCTGC GAGCAGGACA AGGCCGAGCG GTATCGCGAC
ATCTCGAACC GGATCTCGGA CGCGCTCGAC TTCATGTCGG CCGCGGGCGT GAACGGTTCG
ACCTCGCACG ATCTGGCGAC GGTGGACTTC TACACCTCGC ACGAGGCGCT GCTGCTGGAA
TATGAAGAGG CGCTCTGCCG GATCGATTCG ATCACCGGCC AGCCGATCGC GGGCTCGGGC
CACATGATCT GGATCGGCGA CCGCACGCGC CAGATCGATG GCGCGCATGT CGAATTCTGC
CGCGGCGTGC TGAACCCGAT CGGGCTGAAA TGCGGCCCCT CGACCACGGT CGAGGATCTC
AAGGTGCTGA TGGCCAAGCT CAACCCGCAG AACGAGGCGG GGCGGCTCAC GCTGATCGCG
CGCTTCGGCG CGGGCAAGGT GGGCGAGCAT CTGCCGCGGC TGATCAAGGC CGTGCGCGAG
GAGGGCGCCA AGGTTACCTG GTGCTGCGAT CCGATGCACG GCAACACGAT CAAGGCGGCC
TCGGGCTACA AGACCCGCCC GTTCGACTCG GTGCTGCGCG AGGTGCGCGA GTTCTTCGCG
ATCCACAAGG CCGAGGGCAC GATCCCCGGC GGCGTGCATT TCGAGATGAC CGGGCAGGAC
GTGACCGAAT GCACCGGCGG CCTGCGTGCG GTGACGGACG AGGATCTCTC GAACCGCTAC
CACACGGCCT GCGATCCCCG CCTCAACGCC TCGCAGTCGC TGGAGCTGGC CTTCCTCGTG
GCCGAGGAAC TGACCACGAT GCGCGAAGCG GGCCGGCGCG TGGCGCTGTA G
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| Protein sequence | MSRGWTKTDW RAKPRIQMPD YPEAAAVEAV EAQLAKYPPL VFAGEARKLK AALAEAAEGR
AFLLQGGDCA ESFAEFSADN IRDTFRVLLQ MAVVLTYGAK VPVVKIGRMA GQFAKPRSAP
TEVINGMELP SYRGDIINGF DPSPESRIPD PRRMLQAYTQ AAASLNLLRA FSTGGFADIH
RVHSWTLGFC EQDKAERYRD ISNRISDALD FMSAAGVNGS TSHDLATVDF YTSHEALLLE
YEEALCRIDS ITGQPIAGSG HMIWIGDRTR QIDGAHVEFC RGVLNPIGLK CGPSTTVEDL
KVLMAKLNPQ NEAGRLTLIA RFGAGKVGEH LPRLIKAVRE EGAKVTWCCD PMHGNTIKAA
SGYKTRPFDS VLREVREFFA IHKAEGTIPG GVHFEMTGQD VTECTGGLRA VTDEDLSNRY
HTACDPRLNA SQSLELAFLV AEELTTMREA GRRVAL
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