Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1082 |
Symbol | |
ID | 5084685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1108226 |
End bp | 1108639 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640482640 |
Product | TP901-1 family phage major tail protein |
Protein accession | YP_001167288 |
Protein GI | 146277129 |
COG category | [S] Function unknown |
COG ID | [COG5437] Predicted secreted protein |
TIGRFAM ID | [TIGR02126] phage major tail protein, TP901-1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.085931 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGTGC AGAACGGCAG GGACCTGCTG GTCAAGGTGG ATCTGACGGG GAGCGGCGTC TTTCAGACGA TGGCCGGGCT TCGCGCCACG AGGATCAGCT TCAACGCGGA GACGGTGGAC GTGACCTCGC TTGAAAGCCA GGGCGGTTGG AGGGAACTGC TGGCGGGGGC GGGCGTGAAA TCGGCGTCCA TCTCGGGCTC GGGCGTGTTC CGGGACGAAG CAACGGACGA ACGGGCCCGG GCGCTGTTCT TTGCCGGCGA GGCGCCGCGC TTTCAGGTGG TGATCCCGAG CTTTGGCGTG GTCGAGGGGC CGTTCCTGAT CTCCGCCATC GAATATGCCG GGAGCCATGA TGGCGAGGCG ACCTACGAGA TGACGCTCGC CTCGGCGGGC AAGCTCGGCT TTGCGGCGCT GTGA
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Protein sequence | MGVQNGRDLL VKVDLTGSGV FQTMAGLRAT RISFNAETVD VTSLESQGGW RELLAGAGVK SASISGSGVF RDEATDERAR ALFFAGEAPR FQVVIPSFGV VEGPFLISAI EYAGSHDGEA TYEMTLASAG KLGFAAL
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