Gene Rsph17025_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1082 
Symbol 
ID5084685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1108226 
End bp1108639 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content67% 
IMG OID640482640 
ProductTP901-1 family phage major tail protein 
Protein accessionYP_001167288 
Protein GI146277129 
COG category[S] Function unknown 
COG ID[COG5437] Predicted secreted protein 
TIGRFAM ID[TIGR02126] phage major tail protein, TP901-1 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.085931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTGC AGAACGGCAG GGACCTGCTG GTCAAGGTGG ATCTGACGGG GAGCGGCGTC 
TTTCAGACGA TGGCCGGGCT TCGCGCCACG AGGATCAGCT TCAACGCGGA GACGGTGGAC
GTGACCTCGC TTGAAAGCCA GGGCGGTTGG AGGGAACTGC TGGCGGGGGC GGGCGTGAAA
TCGGCGTCCA TCTCGGGCTC GGGCGTGTTC CGGGACGAAG CAACGGACGA ACGGGCCCGG
GCGCTGTTCT TTGCCGGCGA GGCGCCGCGC TTTCAGGTGG TGATCCCGAG CTTTGGCGTG
GTCGAGGGGC CGTTCCTGAT CTCCGCCATC GAATATGCCG GGAGCCATGA TGGCGAGGCG
ACCTACGAGA TGACGCTCGC CTCGGCGGGC AAGCTCGGCT TTGCGGCGCT GTGA
 
Protein sequence
MGVQNGRDLL VKVDLTGSGV FQTMAGLRAT RISFNAETVD VTSLESQGGW RELLAGAGVK 
SASISGSGVF RDEATDERAR ALFFAGEAPR FQVVIPSFGV VEGPFLISAI EYAGSHDGEA
TYEMTLASAG KLGFAAL