| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1078 |
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| Symbol | |
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| ID | 5084681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1105610 |
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| End bp | 1106773 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640482636 |
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| Product | HK97 family phage major capsid protein |
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| Protein accession | YP_001167284 |
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| Protein GI | 146277125 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.506947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAG GCCCCGACCC GGCTGGAGAG GCGAAAGCCG CAATGGCCGG CTTCCTGAGG
GAGATCAAGC TCTTTCAGGA TGAGGTGAAG ACCGTGTTGC AACAACAGGA AGAGCGTTTG
ACCATGCTGG ACCGCAAAAC CATGATCTAC GGGCGCCCGG CGCTCTCGGC CGCTGCCGAC
CAGGAGGCCC CGCATCGCAA GGCCTTTGGG GCCTATCTCC GCTCGGGCGA CGACGACGGG
CTGCGCGGGC TTGTCCTGGA GGGCAAGGCG ATGACGACTG CGGTGGCGGC GGACGGCGGC
TATCTGGTGG ATTCCCAGAC GTCGGACACG ATCCGCTCGA TGCTGCTCTC GACGGCCTCG
ATCCGGCAGA TCGCCGGTGT GGTCAATGTG GAGGCCACGA GCTTCGAGGT TCTCATCGAC
CGTACCGAAG TGGGCTCGGG CTGGGCAACC GAGGCGAGCG CCATCAGCGA GAGTGCGACG
CCCGCGATCG AACGCATCTC GATCAAGCTC CACGAGCTGT CGGCCATGCC GAAGGCGAGC
CAGCGGCTTC TGGACGACGC GGCCTTCGAC GTGGAGGGGT GGCTTGCGGG CAAGATTGCC
ACACGCTTCA TGCGGGCCGA GAGCGCGGCC TTCGTGAGCG GCGACGGCGC TGACAAGCCG
CGCGGGTTCC TCGCGCCTGC GAAGGTGCCG AACGCGTCCT GGACCTGGGG CAACATCGGA
TACATCCCCA CGGGCGCGAC GAATGACTTT CTTGGAACGA ACCCGGCCGA CTGCATCATC
AACCTGATCT ATGCGCTGGG CGCCGATTAC CGCGCCAACG CGACCTTCGT GATGAACTCG
AAGACCGCGG GCGCGGTGCG GAAGATGAAG GACTCGGACG GCCGCTTCCT GTGGTCGGAT
GGTCTGGCCG CGGCCGAGCC CGCGCGGCTG ATGGGCTATC CGGTGCTGCT GTGCGAGGAC
ATGCCGGACA TCGCCGCCAA TGCCTTCGCC ATCGCCTTCG GGGATTTTGC AGCGGGTTAC
ACGATCGCCG AGCGGCCGGA GGTTCGGGTG CTGCGCGATC CGTTCTCGGC CAAGCCGCAC
GTCCTGTTCT ACGCCACGAA GCGGGTCGGC GGTGACGTGA CCGATTATGC GGCGATCAAG
CTGCTGAAGA TCGCGGTGTC CTGA
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| Protein sequence | MSAGPDPAGE AKAAMAGFLR EIKLFQDEVK TVLQQQEERL TMLDRKTMIY GRPALSAAAD
QEAPHRKAFG AYLRSGDDDG LRGLVLEGKA MTTAVAADGG YLVDSQTSDT IRSMLLSTAS
IRQIAGVVNV EATSFEVLID RTEVGSGWAT EASAISESAT PAIERISIKL HELSAMPKAS
QRLLDDAAFD VEGWLAGKIA TRFMRAESAA FVSGDGADKP RGFLAPAKVP NASWTWGNIG
YIPTGATNDF LGTNPADCII NLIYALGADY RANATFVMNS KTAGAVRKMK DSDGRFLWSD
GLAAAEPARL MGYPVLLCED MPDIAANAFA IAFGDFAAGY TIAERPEVRV LRDPFSAKPH
VLFYATKRVG GDVTDYAAIK LLKIAVS
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