Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1067 |
Symbol | |
ID | 5083359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1095557 |
End bp | 1096339 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640482625 |
Product | hypothetical protein |
Protein accession | YP_001167273 |
Protein GI | 146277114 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.312621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCCGG CCGCTCCCAT CGCGGCGCTC GGGCGGGCGA CGCTCGGTGC GCTGGCGGCC ATCGGCCGGA TCGCGCTCTT TGCGGCCGCG GTCATCAGCC ACCTCTTCCG GCCGCCCTTC TACCCGCGCG AGTTCCTCAA CGCGCTGATC CAGATCGGCT GGCTCTCGCT GCCGGTCGTC GGCCTCACCG CGATCTTCAC CGGGGGCGCC CTCGCGCTCC AGATCTACGC GGGCGGCGCG CGCTTCTCGG CCGAGGCGGT CGTGCCCTCG ATCGTGGCCA TCGGCATGAC GCGCGAGCTT GGCCCCGTCC TCGGCGGGCT GATGGTCGCG GCCCGGGTGG CCTCCTCGAT CGCGGCCGAG ATCGGCACCA TGAAGGTGAC CGAGCAGATC GACGCCCTCG TGACCCTCTC GACCAACCCG CTGAAGTATC TTGCCGTGCC CCGCGTGCTG GCCGCCACGC TCGCCGTGCC GGTCCTCGTG GCCGTGGGCG ACTCGATCGG CATCGCCGGC GGCTGGCTCG TGGGCGTGAA CCGGCTCGAC TTCAACTCGG CCACCTACAT CAAGAACACC GTGGACTTCC TCGAGGTGTG GGACGTGGGC TCGGGCCTCG TGAAGGGCGC GGCCTTCGGC TTCATCGTGG CCCTGATGGG CTGCTATCAC GGCATGAACT CGGGCCGCGG CGCGCAAGGC GTCGGCCGCG CCACCAAATC CGCCGTCGTC GCGGCCTCGG TCCTGATCCT CGCCGCGAAC TACCTGCTGA CGGAGGTGTT CTTCACCTCA TGA
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Protein sequence | MSPAAPIAAL GRATLGALAA IGRIALFAAA VISHLFRPPF YPREFLNALI QIGWLSLPVV GLTAIFTGGA LALQIYAGGA RFSAEAVVPS IVAIGMTREL GPVLGGLMVA ARVASSIAAE IGTMKVTEQI DALVTLSTNP LKYLAVPRVL AATLAVPVLV AVGDSIGIAG GWLVGVNRLD FNSATYIKNT VDFLEVWDVG SGLVKGAAFG FIVALMGCYH GMNSGRGAQG VGRATKSAVV AASVLILAAN YLLTEVFFTS
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