| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1061 |
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| Symbol | |
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| ID | 5084660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1090019 |
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| End bp | 1090684 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640482619 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001167267 |
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| Protein GI | 146277108 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.248374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC TGCCCTCGCC CCGCATCGCC CTTGTAACCG GAGCCTCCCG CGGGCTCGGC
ACCGCGATCG CCGAGGAACT CGGCGTTGCG GGCTGGCATG TGGTCGCCGT CGCTCGCACC
ACGGGCGGGC TCGAGGACAT GGACGACCGC ATCCGCGGCC GCAGGCCGGG CGCCGAGCCC
GCCACGCTCG CGCCGATGGA CGTGACCAAC GACGATGCGA TGCGCCACCT CTGCCGCTCG
ATCTATGACC GCTGGGGGGC GGTGCATCTC TGGGTCCATG CGGCCATCCA TGCGGCACCG
CTCTGCCCGT CGGGCCATAT CGAGCCCAAG GACTGGGACA AGTCGATCGC GACCAACGTG
CGGGCCACCG GCATCCTGAT CCCCATGGTC GAGCCGCTGC TGCGTGCCGG ACAGGGCACC
GCGCTCTTCT TCGACGATCC GCGCGGCGGC GAGCCCTTCT TCGGCTCCTA TGGCGCGACC
AAGGCCGCAC AGATGGCCCT CGTGCGGAGC TGGCAGGCCG AGACCCGCAA GATCGGCCCG
CGCGTCCAGA TCGAGACCCC GAATCCGATG CCGACCGCCA CCCGCGGCCG TTTCTACCCC
GGCGAGGATC GCGCGAAACT CGCCGACATC CACACCGAGG CGCAGCGGAT CCTGGCGCTG
ATCTGA
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| Protein sequence | MSTLPSPRIA LVTGASRGLG TAIAEELGVA GWHVVAVART TGGLEDMDDR IRGRRPGAEP
ATLAPMDVTN DDAMRHLCRS IYDRWGAVHL WVHAAIHAAP LCPSGHIEPK DWDKSIATNV
RATGILIPMV EPLLRAGQGT ALFFDDPRGG EPFFGSYGAT KAAQMALVRS WQAETRKIGP
RVQIETPNPM PTATRGRFYP GEDRAKLADI HTEAQRILAL I
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