Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1057 |
Symbol | |
ID | 5083349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1082402 |
End bp | 1084270 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640482614 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001167263 |
Protein GI | 146277104 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGCC TCCTTCTGCA GGCAAGCATC TACCTCGGCG CGGCGCTGCT GATCGTGCCG CTCGCCGTGC GCGCGGGCTT CGGCTCGGTC CTGGGCTATC TGGCGGCCGG GATCGTCATG GGGCCGGTGC TGGGTCTTGC CGGAGCCGAG ACCGGAGACC TGCGCCACTA TGCCGAGTTC GGCGTCGTGC TGATGCTGTT CCTCGTGGGA CTGGAACTCG ACCCGGCGAC GCTCTGGGGG ATGCGCCAGT CGCTCGTGGG GCTCGGCGGG CTGCAGATCG GTCTCACGAG CTTCGTAGCG GCGCTCGGCC TCGCCTGGCT CGGGTTCACT TGGCAGGAAG CGGCCGTGCT GGGGATGGTC GCGGCGCTCT CCTCGACGGC CATCGTGCTC CAGACCATGA CCGAGCGGCG CATGCTGCGC ACCGCCGGGG GCCGCAGCTC CTTTGCCGTG CTGCTGGCGC AGGACATTGC GGTGGTGCCG ATGCTGGCGC TGGTGCCGCT GCTGGCGCTG CGTCCCTCGG CCAGCGCCCA CCTGCCGCAT GACGCCGCCG AAGGCCCGGC GCGGCCGATC ATCGGCTTCC TGCAATCGCT GCCGGGCTGG GCCGACACGC TGGTGATGCT GGGCGTCGTC GGCTTCATCG TGCTGGGCGG GCACTACCTC ACGCGGCCGG TGTTCCGCTA TGTCCATGCC TCGCGCCTGC CCGAGATGGG CAGCTTCATC GCCCTCTTCA CCGTCGCGGG CACATCCTTC CTGACCATGG TCGTGGGCCT GTCGCCCGCG CTCGGCACGT TTCTCGCGGG CGTCGTGCTG GCCAACTCCG AGTTCCGCCA CCAGCTCGAG GCCGACATCC GTCCCTACAA GGGCATCCTG CTCGGCCTCT TCTTCATGGC CGTCGGGATC GGGATCGACT TCCGCCTGCT CGCGGCCGAC CCCTGGCCGC TCATCGCGCT CACGCTGGGG CTGGTGTTCG TCAAGGTGCT GGTGCTGGCC GCGCTGGCCG AGACCTTCGG GCTCCGGGGG CGCGACCGCT GGCTCCTGAC CCTCGGCCTT GCGCAGGCGG GCGAGTTCGG CTTCGTGCTG GTGGGCTTTG CGGCACAGGA GGCCATCCTC ACCTCCCTCC TGGCGCAGAA GACGCTGATC GTGATCAGCC TCTCGATGCT GGTGACACCC GTCCTCTTCC TCATCGCCGG CTGGTTGTCG GGCCTGGGCG AGGAACAGCC GGCCGGCCGG CCCGACCCGA TCGACGAGAA GGGTCGCGTC ATCATCGCGG GCATCGGCCG CTTCGGGCAG GTGGTGAACC GCCTCGTGCG GATGAGCGGC ATCCAGACGG TCGTTCTCGA CCATGACATG ATGGCCGTGC AGATCATGCG CCGCTTCGGC GTCAAGGGCT TCTTCGGCGA CCCGACGCGC CCCGATCTGC TGCAGGCGGC CGGTCTGGAC GAGGCGGCGG TGCTGGTGGT GGCGGTGGAC GACCGCGAGA ATGCGATCAG GATCGTCCGC TACGCCCGAC AGGTCCGGCC CGACCTGCAT ATCGTGGCCC GCGCCCGCGA CCGGGTGCAT GTCTATGAAC TCTATCAGGC CGGCGCGGAC GACATCGTGC GCGAGACCTT CGACAGCTCG ATCCGGGCCG GGCGCTATGT GCTCGAGAAC ATGGGATTCA GCGAATATGA GGCGGCCCAG CGGTCGCGCA CCTACTACCG CGTGGACCGG GCCGCGATGC GCGATCTGGC CGAGCTCTGG GTGCCCGGCC AGCCCGCGCA TCTCAACGAC GCCTATGTGA CCCGCGCCCG GCAGCTCGAT GCCGATCTCG AGACGGCGCT GCTCGAGGAA GCGGGCCAGG CGCGGCCCGA TCCCGAGGCT GCGGAATAG
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Protein sequence | MESLLLQASI YLGAALLIVP LAVRAGFGSV LGYLAAGIVM GPVLGLAGAE TGDLRHYAEF GVVLMLFLVG LELDPATLWG MRQSLVGLGG LQIGLTSFVA ALGLAWLGFT WQEAAVLGMV AALSSTAIVL QTMTERRMLR TAGGRSSFAV LLAQDIAVVP MLALVPLLAL RPSASAHLPH DAAEGPARPI IGFLQSLPGW ADTLVMLGVV GFIVLGGHYL TRPVFRYVHA SRLPEMGSFI ALFTVAGTSF LTMVVGLSPA LGTFLAGVVL ANSEFRHQLE ADIRPYKGIL LGLFFMAVGI GIDFRLLAAD PWPLIALTLG LVFVKVLVLA ALAETFGLRG RDRWLLTLGL AQAGEFGFVL VGFAAQEAIL TSLLAQKTLI VISLSMLVTP VLFLIAGWLS GLGEEQPAGR PDPIDEKGRV IIAGIGRFGQ VVNRLVRMSG IQTVVLDHDM MAVQIMRRFG VKGFFGDPTR PDLLQAAGLD EAAVLVVAVD DRENAIRIVR YARQVRPDLH IVARARDRVH VYELYQAGAD DIVRETFDSS IRAGRYVLEN MGFSEYEAAQ RSRTYYRVDR AAMRDLAELW VPGQPAHLND AYVTRARQLD ADLETALLEE AGQARPDPEA AE
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