| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1053 |
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| Symbol | |
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| ID | 5083345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1079518 |
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| End bp | 1080060 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640482610 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_001167259 |
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| Protein GI | 146277100 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGAAG ACGAAAAGGC CCTGCAGCTT GTGCATGGCC GTGTGAAATG GTTCGATCCG
GCAAAAGGCT TCGGGTTCAT CGTGACCGAG GAGAACGGAG CCGATATCCT GCTCCACGCC
AATGTCCTTC GGAACTATGG CCAGAGTTCG GTGGCGGACG GGGCGGGCAT CACCGTAAAG
GTCCAGAGCA CCCAGCGGGG CGTTCAGGCC GTCGAGGTGG TCGAGATCGA GCCGCCGGCC
GGGACGACGT TCCAGCTGAG CGAGGACAGC GAGGCCACGA CCCCCGAGGA GATCGCCTCG
CGTCCGCTCG AGCCGGGCCG GGTGAAATGG TTCGACAAGG GCAAGGGCTT CGGCTTCGCC
AATGTCTTCG GCCGGTCCGA GGATGTCTTC ATCCATGTCG AGGTCCTGCG GATGTCGGGC
TTCGCCGACC TTGCCGCGGG CGAGGCGGTG GCGCTGCGCA TCATCGAGGG GCGGCGCGGG
CGCATGGCGG TGCAGGTGGT CTCATGGGAA GCGGCGGCGC GTCAGCATCA GCAACCGGTC
TGA
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| Protein sequence | MVEDEKALQL VHGRVKWFDP AKGFGFIVTE ENGADILLHA NVLRNYGQSS VADGAGITVK
VQSTQRGVQA VEVVEIEPPA GTTFQLSEDS EATTPEEIAS RPLEPGRVKW FDKGKGFGFA
NVFGRSEDVF IHVEVLRMSG FADLAAGEAV ALRIIEGRRG RMAVQVVSWE AAARQHQQPV
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