Gene Rsph17025_1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1041 
Symbol 
ID5083333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1067826 
End bp1068788 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content67% 
IMG OID640482598 
Productlipoyl synthase 
Protein accessionYP_001167247 
Protein GI146277088 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.456596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGAA AACTTGTGCG CGACCTGAAG ATTCCCGACC AGCGCCACCC GGAAAAGGCG 
CACCGCCCGG ACAATGACCA GCCCAGGAAG CCCTCCTGGA TCCGCGTCAA GGCTCCGACG
TCCGAGGGCT ACAAGGAAAC GCGGGACATC ATCCGCGGCC AGAAGCTCGC GACCGTCTGC
GAAGAGGCGG GCTGCCCCAA TGTCGGCGAA TGCTGGGGGC AGGGTCACGC GACCATGATG
ATCATGGGCG AGATCTGCAC GCGCGGCTGC ACCTTCTGCA ACGTGGCCAC CGGCAAGCCT
CAGGCGCTCG ACGCCTTCGA GCCGGGGCGC GTCGCCCATG CCGTCAGCCA GCTCGGCCTC
AAGCATGTCG TGGTGACGAG CGTGGATCGC GACGATCTGG AGGATGGCGG GGCCGAGCAT
TTCGCCCAGA CGATCCGCGC GATCCGTCAC CGGGCGCAGG GCACCACGGT CGAGGTGCTG
GTGCCGGATT TCCTGAAATG CGGACCCGAG GCGCTCGAGA CCGTGGTGGC GGCGCGTCCC
GACGTGTTCA ACCACAATCT CGAGACGGTG CCGGGCCTCT ATCCCGAGGT CCGGCCCGGC
GCGCGCTACT TCCACTCGCT GCGGCTGCTC CAGCGGGCCA AGGAGCTGGA TCCGCAGATC
TTCACCAAGT CGGGGATCAT GGTGGGCCTT GGCGAGGACC GGCAGGGCGT GATGCAGGTG
ATGGACGACA TGCGCGCGGC GGGCGTGGAT TTCCTGACCA TCGGCCAGTA TCTGCAGCCC
ACGCCGAAGC ACCACCGGGT TGACCGTTTC GTGACGCCCG AGGAATTTGC GAGCTACGAA
AAGGCCGCCT ACGGCAAGGG CTTCCTGATG GTATCGGCCA CGCCGCTTAC CCGGTCGTCC
TACCATGCCG GCGAGGATTT CGCCCGCCTG CGCGCCGCGC GGCTGGAGCG TCTGGGCGCC
TGA
 
Protein sequence
MIGKLVRDLK IPDQRHPEKA HRPDNDQPRK PSWIRVKAPT SEGYKETRDI IRGQKLATVC 
EEAGCPNVGE CWGQGHATMM IMGEICTRGC TFCNVATGKP QALDAFEPGR VAHAVSQLGL
KHVVVTSVDR DDLEDGGAEH FAQTIRAIRH RAQGTTVEVL VPDFLKCGPE ALETVVAARP
DVFNHNLETV PGLYPEVRPG ARYFHSLRLL QRAKELDPQI FTKSGIMVGL GEDRQGVMQV
MDDMRAAGVD FLTIGQYLQP TPKHHRVDRF VTPEEFASYE KAAYGKGFLM VSATPLTRSS
YHAGEDFARL RAARLERLGA