Gene Rsph17025_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1039 
Symbol 
ID5084656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1065654 
End bp1066316 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID640482596 
Productinvasion associated locus B family protein 
Protein accessionYP_001167245 
Protein GI146277086 
COG category[R] General function prediction only 
COG ID[COG5342] Invasion protein B, involved in pathogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCA ATCAACTGAA AACCCTTTGC GTCATGGCCC TCGGCCTCGC CCTCGCCCCG 
ACGGCCTGGG CGCAGGAGAC GCCCGCGGCA CCGGCCGCCG AAGCCCCGGC CGCGCAAGCT
CCCGCCGAAG GGGCCGCCGC TCCGCAGGGT CTGTCAATGG GAGAGGAAGA GCCGTCCGAC
GGGATCGGCT CCACCTATGT CGCCGAAACG CACGGCGACT GGCAGCAGCG CTGCGTCCGC
ACCGAGGACG GGGCCGACCC CTGCCAGATG TATCAGCTTC TGAAGGATGC CGAGGGCAAC
TCGGTCGCCG AGATCAGCAT GTTCGCGCTC CCGGCCGGCC AGCAGGCCGC GGCCGGCGCG
ACCATCGTGG CGCCGCTCGA GACGCTGCTG ACGGCGAACC TGGCTCTGGG CGTCGATGCG
GCCAAGCCCA AGGTCTATCC CTTCTCCTGG TGCAACCGCG TGGGCTGCTT TGCGCGCGTG
GGCTTCACCC AGGCGGAGGT GGACGCGTTC AAGAAGGGCA ACAAGAGCGT GGTGACAATC
GTTCCGGCCG TCGCACCCGA CCAGAAGGTC GCGCTGACCG TCTCGCTCAA GGGCTTCACC
GCCGCCTATG ACGCGGTCAA GAGCGCGAAC GAAAAGGCCG ACGCGGCTCC TGCCGGCAAC
TGA
 
Protein sequence
MSSNQLKTLC VMALGLALAP TAWAQETPAA PAAEAPAAQA PAEGAAAPQG LSMGEEEPSD 
GIGSTYVAET HGDWQQRCVR TEDGADPCQM YQLLKDAEGN SVAEISMFAL PAGQQAAAGA
TIVAPLETLL TANLALGVDA AKPKVYPFSW CNRVGCFARV GFTQAEVDAF KKGNKSVVTI
VPAVAPDQKV ALTVSLKGFT AAYDAVKSAN EKADAAPAGN