Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1039 |
Symbol | |
ID | 5084656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1065654 |
End bp | 1066316 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640482596 |
Product | invasion associated locus B family protein |
Protein accession | YP_001167245 |
Protein GI | 146277086 |
COG category | [R] General function prediction only |
COG ID | [COG5342] Invasion protein B, involved in pathogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGCA ATCAACTGAA AACCCTTTGC GTCATGGCCC TCGGCCTCGC CCTCGCCCCG ACGGCCTGGG CGCAGGAGAC GCCCGCGGCA CCGGCCGCCG AAGCCCCGGC CGCGCAAGCT CCCGCCGAAG GGGCCGCCGC TCCGCAGGGT CTGTCAATGG GAGAGGAAGA GCCGTCCGAC GGGATCGGCT CCACCTATGT CGCCGAAACG CACGGCGACT GGCAGCAGCG CTGCGTCCGC ACCGAGGACG GGGCCGACCC CTGCCAGATG TATCAGCTTC TGAAGGATGC CGAGGGCAAC TCGGTCGCCG AGATCAGCAT GTTCGCGCTC CCGGCCGGCC AGCAGGCCGC GGCCGGCGCG ACCATCGTGG CGCCGCTCGA GACGCTGCTG ACGGCGAACC TGGCTCTGGG CGTCGATGCG GCCAAGCCCA AGGTCTATCC CTTCTCCTGG TGCAACCGCG TGGGCTGCTT TGCGCGCGTG GGCTTCACCC AGGCGGAGGT GGACGCGTTC AAGAAGGGCA ACAAGAGCGT GGTGACAATC GTTCCGGCCG TCGCACCCGA CCAGAAGGTC GCGCTGACCG TCTCGCTCAA GGGCTTCACC GCCGCCTATG ACGCGGTCAA GAGCGCGAAC GAAAAGGCCG ACGCGGCTCC TGCCGGCAAC TGA
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Protein sequence | MSSNQLKTLC VMALGLALAP TAWAQETPAA PAAEAPAAQA PAEGAAAPQG LSMGEEEPSD GIGSTYVAET HGDWQQRCVR TEDGADPCQM YQLLKDAEGN SVAEISMFAL PAGQQAAAGA TIVAPLETLL TANLALGVDA AKPKVYPFSW CNRVGCFARV GFTQAEVDAF KKGNKSVVTI VPAVAPDQKV ALTVSLKGFT AAYDAVKSAN EKADAAPAGN
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