Gene Rsph17025_1026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1026 
Symbol 
ID5084643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1053392 
End bp1053871 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content66% 
IMG OID640482583 
ProductTspO and MBR like protein 
Protein accessionYP_001167232 
Protein GI146277073 
COG category[T] Signal transduction mechanisms 
COG ID[COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACA TGGACTGGGC TCTTTTCCTC ACCTTCCTCG CCGCCTGCGG TGCGCCCGCG 
ACGACGGGGG CGCTGATGAA GCCCGACGAA TGGTATGACA ATCTGAACAA GCCCTGGTGG
AACCCCCCGC GCTGGGTGTT CCCGCTGGCC TGGACCTCGC TCTATTTCCT GATGAGCCTG
GCCGCCATGC GGGTGGCGCA GCTTGATGGG TCTGGGCAGG CGCTGGCCTT CTACGCCGCC
CAGCTTGCCT TCAACACGCT CTGGACGCCC GTCTTCTTCG GGCTGAAGCG GATGTCGACG
GCGCTCGGGG TCGTCGTCGT GATGTGGCTC TTCGTGGCCG CGACGATGTG GAGCTTCTTC
CAGCTCGACA CCTGGGCTGG CGTGCTGTTC GTGCCCTACC TGATCTGGGC CACGGCCGCG
ACCGGCCTGA ACCTCGAGGC GGTGCGCCTG AACTGGAGCC GCCCCGAAGC CCGGGCCTGA
 
Protein sequence
MMNMDWALFL TFLAACGAPA TTGALMKPDE WYDNLNKPWW NPPRWVFPLA WTSLYFLMSL 
AAMRVAQLDG SGQALAFYAA QLAFNTLWTP VFFGLKRMST ALGVVVVMWL FVAATMWSFF
QLDTWAGVLF VPYLIWATAA TGLNLEAVRL NWSRPEARA