| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1025 |
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| Symbol | |
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| ID | 5084642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1052298 |
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| End bp | 1053362 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640482582 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_001167231 |
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| Protein GI | 146277072 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCCA CAGCCGACCT CGATGCCTGC CGCGAGCTGA TCCGCACCGG CTCCTACTCC
TTCCACGCGG CTTCGCGCCT CTTGCCCGAG AAGGTACGGG CGCCGTCGCT GGCTCTCTAT
GCCTTCTGCC GCGTCGCGGA CGATGCGGTG GACGAGGCGG TGAACGAGGG CCAGCAGGAA
GATGCCGAGG CCAAGCGGCG CGCGGTCCTC AGCCTGCGCG ACCGGCTGGA CCTCGTCTAT
GCCGGTCGGC CGCGCAACGC GCCGGCCGAC CGTGCCTTCG CCGCCGTGGT GGAAGAGTTC
GAGATGCCGC GCACCCTGCC CGAGGCGCTG CTCGAGGGGC TGGCCTGGGA TGCGGTGGGC
AAGTCCTACG ACACCTTCTC GGGCGTGCTG GACTATTCGG CGCGGGTCGC GGCGGCGGTG
GGGGCCATGA TGTGCGTCCT CATGCGCGTG CGCGATCCCG ATGTGCTGGC ACGGGCCTGC
GATCTCGGAC TGGCCATGCA GCTGACCAAC ATCGCGCGCG ACGTCGGCAC CGATGCGCGC
TCGGGGCGGA TCTACCTGCC GCGCGAATGG ATGGAGGAGG CGGGGCTTCC GGTCGAGGAG
TTCCTTGCCA ACCCCGTCGC CTGCGACCGC ATCCGCGCCG TGACGCGCCG CCTGCTGCGG
GCGGCGGACC GGCTCTACTA CCGCTCGGAA TCGGGTGTCT GCGGCCTGCC GCTGGCCTGC
CGCCCCGGCA TCTACGCCGC GCGCCATATC TATGCGGCGA TCGGCCGCGA GATCGCGCGC
AATGGCTATG ACAGCGTGAC CCGCCGCGCC TTCACCAACA AGCGGCAGAA ACTGGTGTGG
CTGGCCGTCT CGGCCACGCG CGCCGCTCTC ACCCCGATCG GACCCGGCTG CGCGACGCTT
CATGCGGCGC CCGAGCCGGA GGTTGCCTTC CTCGTCAACG CCGCCGCCCG TGCCCGACCG
CAACGCGGCC GGTCCGAGGC GCTGATCGCG GTCCTCGCCC AGCTCGAGGC GCAGGACAGG
CAGATTGCCC GGCAGAGGAT GGGGAACCGG GTCAACCCGA TCTAG
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| Protein sequence | MIATADLDAC RELIRTGSYS FHAASRLLPE KVRAPSLALY AFCRVADDAV DEAVNEGQQE
DAEAKRRAVL SLRDRLDLVY AGRPRNAPAD RAFAAVVEEF EMPRTLPEAL LEGLAWDAVG
KSYDTFSGVL DYSARVAAAV GAMMCVLMRV RDPDVLARAC DLGLAMQLTN IARDVGTDAR
SGRIYLPREW MEEAGLPVEE FLANPVACDR IRAVTRRLLR AADRLYYRSE SGVCGLPLAC
RPGIYAARHI YAAIGREIAR NGYDSVTRRA FTNKRQKLVW LAVSATRAAL TPIGPGCATL
HAAPEPEVAF LVNAAARARP QRGRSEALIA VLAQLEAQDR QIARQRMGNR VNPI
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