| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1013 |
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| Symbol | |
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| ID | 5084630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1037944 |
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| End bp | 1039359 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640482570 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_001167219 |
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| Protein GI | 146277060 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02040] transcriptional regulator PpsR |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.188495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGTCAG AAGGCAGAGA TACGCTGGCC GGCGGGGGGC TCCCGCCTCT CGCTCCCGAC
ATGGTGCGCG ATGTGGTGGC CACCGCGGCC GACATCTCGC TCATGATCTC GCCGGAGGGG
CTGATCCGGT CGGTGATGGT CAATCCGCAC CATCCGAGCT TCGGCCAGCT GTCGGCCTGG
GAAGGTCAGC GTCTCGACGA GGTGCTCACG CCCGAGAGCG TTACGAAGTT CCGCCTGCGC
AGCGAGGGGC TGGAGCCGGG CCGCGGCTCG ATCGCGGTCG AGCTGAACCA CGCCGATCCG
CGCAGCTTCG AGTTTCCCGT CCGCTACATC CTTCATCGCC TGCCCGAGGA TCGCTCGATC
CTGATGCTCG GGCGCGACCT GCGCCCCATC GCCGAGGTGC AGCAGCAGCT CGTCGCCGCG
CAGCTTGCGA TGGAACGGGA CTACGAGACC CAGCGCGAGA TGGAGACGCG CTACCGCGTG
ATCCTCGATG TCTCGCGCGA TCCGATGGTG CTGGTCTCGA TGTCCACCGG GCGGATCGTG
GATCTGAACG GGGCGGCGGG GATGCTGCTC GGCGGCGTGC GGCAGGATCT GCTCGGGGCC
GCCATCGCGC AGGAGTTCGA GGGCCGGCGC CGGGGCGAGT TCATGGAGGC GATGGCGAAT
CTCGCCGCCA CCGAAAGCGC GGCCCCGCTG GAGCTGGTGG CGCGCCGGTC GCAGAAGCGG
CTTCTGGTGG TGCCGCGGGT CTTCCGGGCG GCGGGCGAGC GGCTTCTGCT CTGCCAGCTC
GACCCGGCCG ACGTGGCGCA ACCCGTGAGT GACGAGCTGC TGAACAATCT GGCGCGGCTT
TATCACGAGG GGGTGGACGG CATCGTCTTC ACCGACGCCG AGGGCACGAT CCGCGGCGCG
AACGAGGCGT TCCTCAATCT GACCGACTCG TCGAGCCTGG CGGCGATCCG CGGCCGCTCG
CTGGCCGATT TCCTCGCGCG CGGCACGGTT GACCTGCGCG TGCTGATCGA CAGTGTCAGG
CGCACTGGAC AGCTGCGGCT CTATGCCACC CGACTCACGA CCGACTTCGC GGGGCAGATT
GCCGCAGAGC TGTCGGCCAC CTGGCTCGAC GATCGTGAGC ATCCGCTGCT CGTGCTCGTG
GTGCGGGATA CGAGCCGCGC CGACACGCTG CGCCGTCCGA TCCCGGCGAC CGGCGTGGTG
GACGAACCCG TCCGCAACGT CATGGAGCTT GTGGGCAACT CGACCCTCAA GGACATCGTG
GCCGAAACCA CGGACGTCGT TGAGAAAATG TGCATCGAGA CGGCGCTGGA ACTGACGCGG
AACAACCGGG TCGCGGCGGC CGAGATGCTG TCGCTCTCGC GCCAGTCCCT CTATGTGAAG
CTGCGCAAGT TCGGGCTGCT CAACAAGGAC GAGTAG
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| Protein sequence | MTSEGRDTLA GGGLPPLAPD MVRDVVATAA DISLMISPEG LIRSVMVNPH HPSFGQLSAW
EGQRLDEVLT PESVTKFRLR SEGLEPGRGS IAVELNHADP RSFEFPVRYI LHRLPEDRSI
LMLGRDLRPI AEVQQQLVAA QLAMERDYET QREMETRYRV ILDVSRDPMV LVSMSTGRIV
DLNGAAGMLL GGVRQDLLGA AIAQEFEGRR RGEFMEAMAN LAATESAAPL ELVARRSQKR
LLVVPRVFRA AGERLLLCQL DPADVAQPVS DELLNNLARL YHEGVDGIVF TDAEGTIRGA
NEAFLNLTDS SSLAAIRGRS LADFLARGTV DLRVLIDSVR RTGQLRLYAT RLTTDFAGQI
AAELSATWLD DREHPLLVLV VRDTSRADTL RRPIPATGVV DEPVRNVMEL VGNSTLKDIV
AETTDVVEKM CIETALELTR NNRVAAAEML SLSRQSLYVK LRKFGLLNKD E
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