Gene Rsph17025_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1006 
Symbol 
ID5084623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1028091 
End bp1028759 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content66% 
IMG OID640482563 
ProductMg-protoporphyrin IX methyl transferase 
Protein accessionYP_001167212 
Protein GI146277053 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR02021] magnesium protoporphyrin O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.788103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.633954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT ATTCGACCAC CCGCGACCGT GTCGAACATT ACTTCGACCG CACCGCCACC 
CATACCTGGG AGCGGCTGAC CTCGTCCGCG CCGGTGAGCC GGGTCCGCCA GACGGTCCGC
GAGGGCCGCG ACACGATGCG GGCGAAGATG CTCTGGCGGC TGCCGAAGGA TCTGACCGGC
CTGCGCGTGC TGGATGCCGG CTGCGGCGCG GGCCAGATGA CGGCCGAGCT TGCGGCCCGC
GGGGCGCAGG TGACGGCGGT GGACATCTCG CCGCAGCTGG TCGAGATCGC GCGGAAACGC
CTGCCGCCCG AGCATCTCGA CCGCGTGACC TTCGCCAGCG GAGACATGCT GTCCGATGAT
CTGGGTCCGT TTGACTATGT CGTCGCGATG GACAGCCTGA TCTACTACAC CGACGAGGAC
ATCGCGAAGG CGCTGGACAA GCTGGGCGCG AGAACGCGGC ATTCGGTCGT CTTTACCGTA
GCGCCGCGAA CGCCTTTTCT GATGGCGTTT TGGTGGATGG GAAAGCTGTT CCCGCGTTCC
GACCGCTCGC CGGTGATGAT CCCGCATCCG TTCAGGCCTC TGAATGAGGC CACGGGGGAT
CGGCTGGTGA AGATCGGTCG GGTCTCGCGC GGCTTCTACA TCTCCGAGTG TCTGGAGTTC
CGGCCGTGA
 
Protein sequence
MTDYSTTRDR VEHYFDRTAT HTWERLTSSA PVSRVRQTVR EGRDTMRAKM LWRLPKDLTG 
LRVLDAGCGA GQMTAELAAR GAQVTAVDIS PQLVEIARKR LPPEHLDRVT FASGDMLSDD
LGPFDYVVAM DSLIYYTDED IAKALDKLGA RTRHSVVFTV APRTPFLMAF WWMGKLFPRS
DRSPVMIPHP FRPLNEATGD RLVKIGRVSR GFYISECLEF RP