Gene Rsph17025_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1000 
Symbol 
ID5083216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1023162 
End bp1024253 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content65% 
IMG OID640482557 
Productmagnesium-protoporphyrin IX monomethyl ester cyclase 
Protein accessionYP_001167206 
Protein GI146277047 
COG category 
COG ID 
TIGRFAM ID[TIGR02029] magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCT CGCCCGGAGA CCTGTCCCCC GCGCTCGATC CCGAAGCCGT CGCCGACACG 
ACCGCCATGG CGACGGAAAC CCACATCCTC AACCCGCGCT TCTACACCAC CGATTTCGAC
GAACTCGACC GCGTGGACGT GACCCCGATC CGCGCCCAGT GGGACGAGCT GATCGCCGAG
ATGAAGGCGG ACCCGAACAA GGGCCACTTC AAGAAGACCG ACGCGTGGGA CCGGATCGAC
TGGGAGGCGA TGGACCCGGC CCTGCGGGTC GAGTTCATCG ACTTCCTCGT GTCCTCCTGC
ACGGCCGAGT TTTCGGGCTG CGTGCTCTAC AAGGAGATGA AGCGCCGGGG CTCGAACCCC
GACATCTGCG AGCTGTTCAG CTACATGGCG CGCGACGAAG CGCGGCACGC GGGCTTCATC
AACGACGCGC TGCGCGAGGC GGGCGTGGCG GTGAACCTCG GCTTCCTGAC CAAGGCCAAG
AAATACACCT ATTTCCGGCC GAAGTTCATC TACTACGCCA CCTACCTGTC GGAAAAGATC
GGCTACGCGC GCTACATCAC GATCTACCGC CACCTCGAGG CCAACCCCGA ACATCGGTTC
CACCCGATCT TCAAATGGTT CAAGGAGTGG TGCAACGACG AGTTCCGCCA CGGCGAGGCC
TTCGCGCTCT TGATGAAGAC CGATCCGAAG CTGACCGACT CGACGGTCAA CCGGCTCTGG
ATCCGCTTCT TCCTGACGGC GGTCTATTCG ACCATGTGGG TGCGCGACCA TGCCCGGCCC
GAGTTTCACA AGGCGCTCGG GGTGGACATC GACTGGTACG ACCAGGAGGT GTTCCGCAAG
ACATCCGAGA TCGCGCGGCA GATCTTCCCG GTCGAGCTGG ACATCGACCA TCCGCGCTGG
AAGCCGGCGC TGAACCGCAT GAACGCCGCC TTCCTTCGGA TGGACCGGGG CAACCGCAGG
GGCGGCCTTG CGGGGCGGCT CGACAAGGTG CTGGGCGGCG CGCAGGCGCT GGCCGCCTTC
ACCGCCCTCT ACACGATTCC GGTCAGGACC AACGCCCTGC CCGCGAATGT GCGACTGGAG
CCGAGCTATT GA
 
Protein sequence
MNASPGDLSP ALDPEAVADT TAMATETHIL NPRFYTTDFD ELDRVDVTPI RAQWDELIAE 
MKADPNKGHF KKTDAWDRID WEAMDPALRV EFIDFLVSSC TAEFSGCVLY KEMKRRGSNP
DICELFSYMA RDEARHAGFI NDALREAGVA VNLGFLTKAK KYTYFRPKFI YYATYLSEKI
GYARYITIYR HLEANPEHRF HPIFKWFKEW CNDEFRHGEA FALLMKTDPK LTDSTVNRLW
IRFFLTAVYS TMWVRDHARP EFHKALGVDI DWYDQEVFRK TSEIARQIFP VELDIDHPRW
KPALNRMNAA FLRMDRGNRR GGLAGRLDKV LGGAQALAAF TALYTIPVRT NALPANVRLE
PSY