| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0994 |
|---|
| Symbol | |
|---|
| ID | 5083210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 1016707 |
|---|
| End bp | 1018635 |
|---|
| Gene Length | 1929 bp |
|---|
| Protein Length | 642 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640482551 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001167200 |
|---|
| Protein GI | 146277041 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTTTG TCCTGATTTT CCTCGCGGCG CTGGTCTCCG CGCTGCCCGT CCTTGCGCAA
GGCACACCGG CCGCGCAGAT CCTCTCCGAA AACCGCGCGC TGGTCGAGAA GGCCTCGCGC
CAGACCATCG GCCCGGTGAT CGGGGCGCTG GCCGCCTCGG GCGACCCGGC CGCCGCCACC
CTGCTGGACG CCTGGGCCAA CCGCGGCCTC GGCCTGCGCG AGAGCGACGG CACCTTCTTC
CTGATCGCGC CCTCCGACGA GGGCTGGGAG CTGCGCGACC TCGACGGCGC GCCCGCCGGA
ACCGCCGGCC GGCGCGAGAT CCAGCAGCTT CGACCGAACA GCGGTGTCCG CGGCCTGATC
GCCACGGCCC TCGTGCAGTT CCAGCTGGCC GATCCCGATC CGGCGCGCCG GTCGGCGGCG
TTGGCCTCCA TGGCCCGCGA TCCCGCGCCG GAGCATCTCG AGCCGCTGCG CGCCGCGCTG
GCGCAGGCGC CCGATCCTGC CATGGCCCGG CTCGAGCGTC TGCTGACCCT GCGCTTCGGT
GCGACCGCCG AAGAGCGGGT CGCCGCCATC GAAAGCTTCG GCGCCGATCT GGGCCTTGAC
CTCCGGGGCG CGCTGAACCC CCTCGTCGCC ACGCGCCGCA TGGCGGTGGA GGGTGAGCCG
CAGGGGCTCA ACATCGCCCG TGAACTGACG CCCGGGCGCG AGATCGCGCG CGAGGAGGCC
TACGACCTGC TGGTGGCCGA AGGGTTGGCC CCCGCCCGGC TCACCCGTGC CGCCGTGCGC
GAGACGCTGG TTGCGCAGAT CCGCGACGGT CAGGTGGCCG GCATCCCGGT CTCTGAACTG
AAGAGCCAGG AGGCCCGCGA CCGCGCCTAT ACAGCACTCG AGGCGCAGGG CATCGTGCCG
CCCGGCGCCA CCGAGGACGA GGTCGACGCC ACGCTCGACC GCTTCCGCTT CCTCGAGGTC
CATGCCGAGC CCGACCCGGC GGTGACCGAG GCCGCCCAGG CCGCGCTCGC CCGGATCGGC
AGGACCGTCG GTCTCATGCA GGCGGCGGAC CTCGCGCTCG ATGCGGTGTC GCTCGCCTCG
ATCTATTTCC TCGCTGCCAT CGGCCTCGCC ATCACCTTCG GCGTCATGCG GGTCATCAAC
ATGGCCCATG GCGAGTTCAT CATGATGGGC GCCTATACCG GCTATGTCGT GCAGCAATGG
ATCGCCGACT ACACGATCTC GATTCTGGTC GCGCTGCCGC TCGCCTTCGC CGTCACTTTC
GCCGCAGGCG TGGCGATGGA GCGGCTGGTG ATCCGCCACC TCTACCGCCG CCCGCTGGAA
ACGCTGCTCG CGACCTTCGG CATCTCGATC GCGCTCCAGC AGCTCGCCAA GAACATCTTC
GGCACCCAGG CCCGGCCGCT GACCGCGCCT GGCTGGCTCG ACGGCGCGCT GAGCTTCAAC
GACGTGGTGT CGATCAGCTA CATCCGCATC GCGATCTTCG TCCTGGCCCT GATCTTCCTT
GGCGTCTTCC TCATCATCAT GAAGCGGACG CGCCTCGGGC TCGAGGTCCG CGCGGTGACG
CAGAACCCGT CGATGGCGGC CTCGATGGGG ATCAACCCCG ACCGGATCAA CATGCTGACC
TTCGGCCTCG GCTCGGGCAT CGCGGGCGTC GCGGGGGTGG CCATCGGCCT CTTCGCCAAG
GTCACCTCGG AGCTGGGGCA GGACTATATC GTGCAGAGCT TCATGACCGT GGTCGTCGGC
GGCGTGGGCA ACATCTGGGG CACGCTTGCG GGGGCCGCGA TGATCGGCGG CGCGCAGAAG
GGGATCGAGT GGCTGAACCC CTCGAACACG CTCGCGGCCC AGACCTACAT GATCCTTCTC
ATCATCATCT TCATCCAGTT CCGGCCGCGG GGGATCATCG CCCTCAGGGG CCGCGCCGCA
GGAGACTGA
|
|---|
| Protein sequence | MRFVLIFLAA LVSALPVLAQ GTPAAQILSE NRALVEKASR QTIGPVIGAL AASGDPAAAT
LLDAWANRGL GLRESDGTFF LIAPSDEGWE LRDLDGAPAG TAGRREIQQL RPNSGVRGLI
ATALVQFQLA DPDPARRSAA LASMARDPAP EHLEPLRAAL AQAPDPAMAR LERLLTLRFG
ATAEERVAAI ESFGADLGLD LRGALNPLVA TRRMAVEGEP QGLNIARELT PGREIAREEA
YDLLVAEGLA PARLTRAAVR ETLVAQIRDG QVAGIPVSEL KSQEARDRAY TALEAQGIVP
PGATEDEVDA TLDRFRFLEV HAEPDPAVTE AAQAALARIG RTVGLMQAAD LALDAVSLAS
IYFLAAIGLA ITFGVMRVIN MAHGEFIMMG AYTGYVVQQW IADYTISILV ALPLAFAVTF
AAGVAMERLV IRHLYRRPLE TLLATFGISI ALQQLAKNIF GTQARPLTAP GWLDGALSFN
DVVSISYIRI AIFVLALIFL GVFLIIMKRT RLGLEVRAVT QNPSMAASMG INPDRINMLT
FGLGSGIAGV AGVAIGLFAK VTSELGQDYI VQSFMTVVVG GVGNIWGTLA GAAMIGGAQK
GIEWLNPSNT LAAQTYMILL IIIFIQFRPR GIIALRGRAA GD
|
|---|
| |