Gene Rsph17025_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0993 
Symbol 
ID5083209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1015342 
End bp1016622 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content63% 
IMG OID640482550 
ProductABC-type branched-chain amino acid transport systems periplasmic component-like protein 
Protein accessionYP_001167199 
Protein GI146277040 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID[TIGR03407] urea ABC transporter, urea binding protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGT TCAGGGGATA TCTGATCGGC ACGGCGCTGG GCCTGTCGCT GGCGGGCGCG 
GCGCTCGCTC AGGAGGACAC GATCAAGATC GGCGTGCTCC ATTCGCTCTC GGGCACGATG
GCGATTTCCG AGACGACGCT GAAGGACACG GTCCTGATGC TCGTCGATCA GCAGAACGCC
AAGGGCGGCC TGCTCGGCAA GAAGCTCGAG GCGGTGGTGG TGGATCCCGC CTCGGACTGG
CCGCTCTTTG CCGAGAAGGC GCGCGAGCTT CTGACCGTCA ACGACGTGGA CGTGATCTTC
GGCTGCTGGA CCTCCGTCAG CCGCAAGTCG GTGCTGCCGG TGATCGAGGA GCTGAATGGC
CTGCTGTTCT ATCCCGTCCA GTATGAGGGC GAGGAATCCT CGAAGAACGT CTTCTACACG
GGCGCCGCGC CGAACCAGCA GGCGATTCCG GCGGTGGATT ACTTCCTCGA GGAACTGGGC
GTCGAGAAGT TCGCGCTCCT TGGCACCGAC TACGTCTATC CGCGCACCAC GAACAACATC
CTCGAAAGCT ACCTGCAGCA GAAGGGCATC GCCAAGGGCG ACATCTTCGT GAACTACACC
CCCTTCGGCC ATTCCGACTG GTCGAAGATC GTGGCGGACG TGAAGGCGCT CGGCGCCGAC
GGCAAGAAGG TGGGCGTGAT CTCGACCATC AACGGCGACG CCAACATCGG CTTCTACAAG
GAGCTGGCCG CCGCCGGCAT CTCGGCCGAC GACATCCCCG TCGTGGCCTT CTCCGTCGGC
GAGGAGGAGC TTTCGGGTCT CGACACGTCG AACCTCGTGG GGCACCTCGC CGCCTGGAAC
TACTTCCAGT CCGCCGAAAG CCCCGAGAAC GAGACCTTCA TCACCGACTG GAAGGCCCGC
ATGGGCGAGA ACCGCGTCAC GAACGACCCG ATGGAAGCCA CCTACATCGG CTTCAACATG
TGGGTGAATG CCGTGACCGA GGCCGGCACG ACCGATGTCG ATCCCGTGGC CGAGGCCATG
ATCGGGCAGA AATTCCCGAA CCTCACCGGC TCCGAGGCCG AGATGCTGCC GAACCACCAT
CTGACCAAGC CCGTGCTGAT CGGCGAGATC CGCGACGACG GCCAGTTCGA CATCATCTCG
CAGACCGATC CGGTGCCGGG CGATGCCTGG ACGGACTTCC TGCCGGAGTC GGCGGTGCTC
GAGTCGGACT GGGCCGAACT CGACTGCGGC ATGTACAACA CCGAGACCAA GAGCTGCGTG
CAGATCAAGT CGAACTACTG A
 
Protein sequence
MKMFRGYLIG TALGLSLAGA ALAQEDTIKI GVLHSLSGTM AISETTLKDT VLMLVDQQNA 
KGGLLGKKLE AVVVDPASDW PLFAEKAREL LTVNDVDVIF GCWTSVSRKS VLPVIEELNG
LLFYPVQYEG EESSKNVFYT GAAPNQQAIP AVDYFLEELG VEKFALLGTD YVYPRTTNNI
LESYLQQKGI AKGDIFVNYT PFGHSDWSKI VADVKALGAD GKKVGVISTI NGDANIGFYK
ELAAAGISAD DIPVVAFSVG EEELSGLDTS NLVGHLAAWN YFQSAESPEN ETFITDWKAR
MGENRVTNDP MEATYIGFNM WVNAVTEAGT TDVDPVAEAM IGQKFPNLTG SEAEMLPNHH
LTKPVLIGEI RDDGQFDIIS QTDPVPGDAW TDFLPESAVL ESDWAELDCG MYNTETKSCV
QIKSNY