Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0993 |
Symbol | |
ID | 5083209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1015342 |
End bp | 1016622 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640482550 |
Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
Protein accession | YP_001167199 |
Protein GI | 146277040 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGT TCAGGGGATA TCTGATCGGC ACGGCGCTGG GCCTGTCGCT GGCGGGCGCG GCGCTCGCTC AGGAGGACAC GATCAAGATC GGCGTGCTCC ATTCGCTCTC GGGCACGATG GCGATTTCCG AGACGACGCT GAAGGACACG GTCCTGATGC TCGTCGATCA GCAGAACGCC AAGGGCGGCC TGCTCGGCAA GAAGCTCGAG GCGGTGGTGG TGGATCCCGC CTCGGACTGG CCGCTCTTTG CCGAGAAGGC GCGCGAGCTT CTGACCGTCA ACGACGTGGA CGTGATCTTC GGCTGCTGGA CCTCCGTCAG CCGCAAGTCG GTGCTGCCGG TGATCGAGGA GCTGAATGGC CTGCTGTTCT ATCCCGTCCA GTATGAGGGC GAGGAATCCT CGAAGAACGT CTTCTACACG GGCGCCGCGC CGAACCAGCA GGCGATTCCG GCGGTGGATT ACTTCCTCGA GGAACTGGGC GTCGAGAAGT TCGCGCTCCT TGGCACCGAC TACGTCTATC CGCGCACCAC GAACAACATC CTCGAAAGCT ACCTGCAGCA GAAGGGCATC GCCAAGGGCG ACATCTTCGT GAACTACACC CCCTTCGGCC ATTCCGACTG GTCGAAGATC GTGGCGGACG TGAAGGCGCT CGGCGCCGAC GGCAAGAAGG TGGGCGTGAT CTCGACCATC AACGGCGACG CCAACATCGG CTTCTACAAG GAGCTGGCCG CCGCCGGCAT CTCGGCCGAC GACATCCCCG TCGTGGCCTT CTCCGTCGGC GAGGAGGAGC TTTCGGGTCT CGACACGTCG AACCTCGTGG GGCACCTCGC CGCCTGGAAC TACTTCCAGT CCGCCGAAAG CCCCGAGAAC GAGACCTTCA TCACCGACTG GAAGGCCCGC ATGGGCGAGA ACCGCGTCAC GAACGACCCG ATGGAAGCCA CCTACATCGG CTTCAACATG TGGGTGAATG CCGTGACCGA GGCCGGCACG ACCGATGTCG ATCCCGTGGC CGAGGCCATG ATCGGGCAGA AATTCCCGAA CCTCACCGGC TCCGAGGCCG AGATGCTGCC GAACCACCAT CTGACCAAGC CCGTGCTGAT CGGCGAGATC CGCGACGACG GCCAGTTCGA CATCATCTCG CAGACCGATC CGGTGCCGGG CGATGCCTGG ACGGACTTCC TGCCGGAGTC GGCGGTGCTC GAGTCGGACT GGGCCGAACT CGACTGCGGC ATGTACAACA CCGAGACCAA GAGCTGCGTG CAGATCAAGT CGAACTACTG A
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Protein sequence | MKMFRGYLIG TALGLSLAGA ALAQEDTIKI GVLHSLSGTM AISETTLKDT VLMLVDQQNA KGGLLGKKLE AVVVDPASDW PLFAEKAREL LTVNDVDVIF GCWTSVSRKS VLPVIEELNG LLFYPVQYEG EESSKNVFYT GAAPNQQAIP AVDYFLEELG VEKFALLGTD YVYPRTTNNI LESYLQQKGI AKGDIFVNYT PFGHSDWSKI VADVKALGAD GKKVGVISTI NGDANIGFYK ELAAAGISAD DIPVVAFSVG EEELSGLDTS NLVGHLAAWN YFQSAESPEN ETFITDWKAR MGENRVTNDP MEATYIGFNM WVNAVTEAGT TDVDPVAEAM IGQKFPNLTG SEAEMLPNHH LTKPVLIGEI RDDGQFDIIS QTDPVPGDAW TDFLPESAVL ESDWAELDCG MYNTETKSCV QIKSNY
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