| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0960 |
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| Symbol | |
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| ID | 5085027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 981708 |
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| End bp | 984032 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640482517 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001167166 |
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| Protein GI | 146277007 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.150868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGACGG TCGTTTCCTC GACCGGGAAC GGCAAGTTTC ATGCCAGCCC CGCGGCATTG
GACCTCATCG ACCTGATGGG CCGGCTGCTG CGGTCGGACG ATCCGGCCGG GATCCAGGAG
GCGCTGGCGC ATGTGGCCCT GAGCTGCGGT GCGGATGTGG CGCAGTTCTG CCGTGCCGTT
CCGGGAGGCG ATCTGGAGAC ATGCCACCAC TGGGCACGCG ATCCTTCCGC GGACGCATTT
CGAACAGGTC TGGCCCTGCC CGCCGGAGAG ACGCCCCTGG TGCTTCGCGA CCGGGCCGAT
GCGGGCGATG CGGCGCTGCG CGCGCAGCTC GAAGCGGCGG GCCTGCGGTC GGTCGTGGCG
ATACCGGCGC TGCGGCAGGA GGCGCTTGCG GGCAACCTCC TGCTGGGCTG GCGATCCCAA
GGGCCCGGTC TGCCGCCCGA GGATCTCGCC GTTCTGCGGT CGCTGGTCGA GGCGATGCTG
GCCGCGGCCG AACAGCGTGA CCACGAGGGA CGTCACGCCC TGTCCCTGCA GGCGCTTCAG
GACGACCGTA TGTTGCTCGA GGCGATCCTG CGCACCAGCA ACTCGGCCAT CATCGCCTTC
GACGGCGAAG CCCGGATCGT CTTTGCCAAC GAGGAAGCCG CGGGCCTGCT GGGCACAGAG
CTTGAGCGGC TGCAGGGATG CACGCTGGAA GGCATCGGCT GCCGGCTGCT GACACGGGAC
GGCGAACCGC TTGCGCCCGA GGATATGCCG GTCCGGCAGG CGATGGCGGA AGGTCATGCT
CTGCGCGGGC TCCATCATGT GCTGATCGGC GCCGACGGGC GCCAGCGTAT CCTGTCGGTC
AATGCCGCGC CGGTCGCGGG CGGCGATGGC GGCGGCGGAG TGCGCGTCGT GGCGACGGTG
GATGATGTCA CCGGCCAGGT GTCGGCCGAC AGCGCGCTGC GGACCGCGCT GGCCGAGGCG
CATCAGCTCG CCTTCTTCGA TCCGCTGACC GGGCTCTACA ACCGCCGCGG CGTGGTCGAG
GTGCTGCGCG ACTGCCTGCA GATCTGCGCG CGGGAAAACT CCTCACTGGC CCTGCTCTAC
ATCGACATCG ACGGGATGCG GCAGGTGAAC GGCACCCGCG GGCACTGGCT GGGCGACCGG
GTGCTTCAGG CCTTGGCCGC GCGGCTCGAG GATCTGCGGC ACGACGGCTG CGATCTGGGG
CGGATCTCGG CCGACGAGTT CGTGCTCACC TGCAGCGAGA GCCACCCCGA TCCCGCCAGC
GCCGTGGCCG CCGCCGAGGT CTCGGCCGAG CGTGTGCTCA CCGAGCTGCG CAAGCCGCTT
GTGGTCGATG GGCTCACCAT CGAGATCACC GTCTCGATCG GCCTCGCCGC CATCACGGCC
GAGGACACGG TCGAGGGCCT GCTGAAGGGC GTCGATCTGG CGGTCATGGC CGCCAAGGCC
GCCGGTGGCG ACCGCGCCTG CGCCTACCGC CCCGACATGG AGCAGGACAT GGTCGGGCGC
GTCGCGCTCG CGCAGGAATT GCGCGAGGCG ATCCGGCGCG ACGAGTTCCG CATCTTCTTC
GAACCGATGG TCCGGCTGGG CGACGGCGGC CTCGAGGTGG TCGGGCAGGA GGCGCTGATC
CGCTGGCAGC ATCCGGTGCG CGGCCTGCTG TCGCCCGTGG CCTTCATCCC CTTCGCCGAG
GAAACCGGGT TCATCCGCGA CATCGACCGC TGGGTCCTGC GCGCCGCGGC GCTGGAGCTG
GCCCGCTGGG CCGACGATCC CGAGCGGCGC CACCTGCGGC TGTCGATCAA CATCAGCTCG
GCCCAGTTCC TCTCGGACGA GTTCGGGCAG ATGGTGCGCG AGGTTCTGGC CGAGACCGGG
GTCGATCCGA CCCGCGTCGA GCTTGAGGTG ACCGAGGGCA CGCTGCTGTC GAACCTCGGC
CTTGCACGGG CCACCATGAT GGATCTGCGG TCCCTGGGCC TGTCGATCGC GCTCGATGAC
TTCGGCACCG GCTTCTCCTC GCTCAGCTAT CTGCGGGACC TGCCGGTGGA CGTGCTCAAG
ATCGATCGGA GCTTCCTCGG CGGGCTGTCG GAGTCGAAGG CGAACCGGAC GATTCTCGAA
GGGATCATAG GCCTCGCCTC GGGCCTGGGC GTGGCGCTGG TGGCCGAAGG TGTCGAAACG
ACCGCGCAGT TTGCCTGGCT GCGGGCCAAG GGGTGCCGGA CCTTCCAGGG CTATCTCTTC
GGGCGCCCGA CGGACGCGCC GCAGCTGACC CTCCCCCCCG AGGTCGAGGC TCTGGCGGCG
CCCGCGTCGG TCGAACGTGC GGCGCTGGGG CACGGTCAGG GCTGA
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| Protein sequence | MPTVVSSTGN GKFHASPAAL DLIDLMGRLL RSDDPAGIQE ALAHVALSCG ADVAQFCRAV
PGGDLETCHH WARDPSADAF RTGLALPAGE TPLVLRDRAD AGDAALRAQL EAAGLRSVVA
IPALRQEALA GNLLLGWRSQ GPGLPPEDLA VLRSLVEAML AAAEQRDHEG RHALSLQALQ
DDRMLLEAIL RTSNSAIIAF DGEARIVFAN EEAAGLLGTE LERLQGCTLE GIGCRLLTRD
GEPLAPEDMP VRQAMAEGHA LRGLHHVLIG ADGRQRILSV NAAPVAGGDG GGGVRVVATV
DDVTGQVSAD SALRTALAEA HQLAFFDPLT GLYNRRGVVE VLRDCLQICA RENSSLALLY
IDIDGMRQVN GTRGHWLGDR VLQALAARLE DLRHDGCDLG RISADEFVLT CSESHPDPAS
AVAAAEVSAE RVLTELRKPL VVDGLTIEIT VSIGLAAITA EDTVEGLLKG VDLAVMAAKA
AGGDRACAYR PDMEQDMVGR VALAQELREA IRRDEFRIFF EPMVRLGDGG LEVVGQEALI
RWQHPVRGLL SPVAFIPFAE ETGFIRDIDR WVLRAAALEL ARWADDPERR HLRLSINISS
AQFLSDEFGQ MVREVLAETG VDPTRVELEV TEGTLLSNLG LARATMMDLR SLGLSIALDD
FGTGFSSLSY LRDLPVDVLK IDRSFLGGLS ESKANRTILE GIIGLASGLG VALVAEGVET
TAQFAWLRAK GCRTFQGYLF GRPTDAPQLT LPPEVEALAA PASVERAALG HGQG
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