| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0954 |
|---|
| Symbol | |
|---|
| ID | 5085021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 975735 |
|---|
| End bp | 976682 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640482511 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001167160 |
|---|
| Protein GI | 146277001 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.383149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.118592 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGCC TGTTCGACAT TCTGCTGTCC GCGACCTTCT GGGCCGCGGC GGTCCGCATC
GCCTCGCCGC TGATCTTCGC CACGATGGGC GAGCTGATCT GCGAGCGGGC GGGCGTGCTG
AACCTCGGGA TCGAGGGGAT CATGGTGATC GGCGCCTTCT CGGGCTGGAT CACAGTCTGG
GCGGGGGCCG GGCTCTGGGA GGGCGTGGCG GTGGCCATGC TGTCGGGAAT GCTCTTCGGC
CTTCTGCACG CCGTGCTCGT GGTGCCCTTC GGCCTCTCGC AGCACGTCGT GGGGCTGGGG
ATCACGCTCC TGGCCACCTC GACCAGCTAC TTTGCCTATC GGCTGATCCT GCCCGAGGTC
ACGAGCCCGC CGCGGATCGA GCCCTTCGCC GTCTGGGAGG TGCCTCTCCT GTCCGAGATC
CCGCTGCTGG GGCCCGCGCT CTTTGCCCAG ACGCCGCTGA CCTACGCAGC CTTTGCCGTG
GCGGCGCTGA CGGCGCTGGT CCTCTGGCGG ACGCCGCTCG GTCTGGCCGT GCGGGCAGCG
GGCGAGAATC CTTCGGCGGT CGATGCGCAG GGGCTCTCGG TCACCGGGCT CCGTATCGGC
GCGGTGATGG TGGGCTCGGG GCTGATGGCG GTGGGCGGCG CCTTCCTCAC CCTCTCGGCC
TTCTCGAGCT TCTTCTTCGA GATGGTGAAC GGCCGCGGCT GGATCTGCAT CGCGCTGGTG
GTCTTCGGCG CGTGGCGGCC CGGCAAGGCC GTGCTCGGCG CGCTCCTCTT TGCCGCCTTC
GACGCGCTGC AGGTGCGGCT TCAGCAGACG CCGGTGGGGC AGGTCGTGCC CTACCAGCTC
TTCCTGATGG CGCCCTATGC GCTCTCGATC GCGGCGCTTG TCCTCATGTC GCGCCGGGCC
GAAGTGCCTG CGGCGCTGAT GCAGCCGTTC AACAGGGGAG AACGCTGA
|
|---|
| Protein sequence | MMSLFDILLS ATFWAAAVRI ASPLIFATMG ELICERAGVL NLGIEGIMVI GAFSGWITVW
AGAGLWEGVA VAMLSGMLFG LLHAVLVVPF GLSQHVVGLG ITLLATSTSY FAYRLILPEV
TSPPRIEPFA VWEVPLLSEI PLLGPALFAQ TPLTYAAFAV AALTALVLWR TPLGLAVRAA
GENPSAVDAQ GLSVTGLRIG AVMVGSGLMA VGGAFLTLSA FSSFFFEMVN GRGWICIALV
VFGAWRPGKA VLGALLFAAF DALQVRLQQT PVGQVVPYQL FLMAPYALSI AALVLMSRRA
EVPAALMQPF NRGER
|
|---|
| |