Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0935 |
Symbol | |
ID | 5085003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 958098 |
End bp | 958547 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640482493 |
Product | transposase IS3/IS911 family protein |
Protein accession | YP_001167142 |
Protein GI | 146276983 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2963] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.089943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.624774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGGGG CGAGTCTCGT TCTGAGGGTT CAGAAGGAGG CGACCATGCC GGATGGCGGT GAAGGGTTCG ACGGCCGGAT CGAGGTGATC CGGCGCACTC GTGGCTATCG GCGTTGGCCG GACGAGGTGA AGGCCCGGAT CGTGGCAGAG AGCTTTCGCC CGGGCGTCCG TGTGGCAGAA GTGGCGCGGC GGCACGGGGT GCTTGCGCAC CAGCTTTCGG CTTGGCGGCG GCAAGCCCGT AAGGGGCTGC TCGCTCTGCC CGAGGACGCG GTGGAGGGCC TGGAGGCTGC CTTCGTGCCC CTGACGGTGG AGCCGGAGTG TGGCGCCGGA CTGGATGGCC TGTCAGGCGT GGTCACCATC GAGATCGGCG CCGTCATCCT TCGGGTTCCG GGTAACGTTC CGGCCGAACG GGCGGCGGCG CTGGTGCGGG CGCTGCAGGA GGCACCCTGA
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Protein sequence | MGGASLVLRV QKEATMPDGG EGFDGRIEVI RRTRGYRRWP DEVKARIVAE SFRPGVRVAE VARRHGVLAH QLSAWRRQAR KGLLALPEDA VEGLEAAFVP LTVEPECGAG LDGLSGVVTI EIGAVILRVP GNVPAERAAA LVRALQEAP
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