Gene Rsph17025_0910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0910 
Symbol 
ID5083388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp928832 
End bp929671 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content70% 
IMG OID640482468 
Productprotein of unknown function, zinc metallopeptidase putative 
Protein accessionYP_001167118 
Protein GI146276959 
COG category[R] General function prediction only 
COG ID[COG2321] Predicted metalloprotease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0387284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGGC GCGGACGGCG GGGCAGCCGG AACATCGAGG ACCGGCGGGG CTCGCGCGTG 
GGCAGCATCG GCGGGATCGG CGGGGCGGGG TTTCTCGCGG TGCTCCTGAT CGGTTGGGCA
CTCGGCGTCG ATGTCACGCC CTTGCTCGAG GGCTCCACGG GATCGCAGGC CCCGCGGGAA
CTTTCGGCCG CGGATCAGGA GGCGGCGGAG TTCGTCTCGG TGACGCTCGC CGACACCGAG
GAGGTCTGGG CCCAGGTTTT CGCCGACCAG CTCGATGCCC GTTACCGGCC GCCGGTGCTG
GTGCTGTTCT CTCAGGCCAC CGGCTCGCCC TGTGGCGGGG CGAACGGGGC GACCGGCCCG
TTCTACTGCC CGCTCGACCG CAAGGCCTAT CTCGACACCG CCTTCTTCGC GACGATGGAG
CGGCAGTTGG GCGCCAGCGG CGACTTTGCG GCCGCCTATG TCGTGGCGCA TGAAATCGGG
CATCATGTGC AGAACGAACT GGGCATCCTC GACGAGGCCA ACGCCCTGCG CGCCCGCGTC
GGCGAGGCCG AGAGCAACGC GATCTCGGTT CGGATCGAGC TGCAGGCCGA CTGCTTCTCG
GGCATATGGG CCCGCCATGC CGAGGCGCAG TTCGGCAGCC TTGAGCCGGG GGACATCGAA
GAGGCCATCA ACGCGGCGCG CCGGATCGGC GACGACACGC TCCAGCGCGC GGCGGGGCGG
GTGCCGATGC CCCACACCTT CACCCACGGC ACCTCCGAGC AGCGGATGCG CTGGTTCGAG
AGGGGCTACG GCTCTGGCAG GCTGGTGGAT TGCGACAGCT TCGGCGCCGA CCGCCTCTGA
 
Protein sequence
MDWRGRRGSR NIEDRRGSRV GSIGGIGGAG FLAVLLIGWA LGVDVTPLLE GSTGSQAPRE 
LSAADQEAAE FVSVTLADTE EVWAQVFADQ LDARYRPPVL VLFSQATGSP CGGANGATGP
FYCPLDRKAY LDTAFFATME RQLGASGDFA AAYVVAHEIG HHVQNELGIL DEANALRARV
GEAESNAISV RIELQADCFS GIWARHAEAQ FGSLEPGDIE EAINAARRIG DDTLQRAAGR
VPMPHTFTHG TSEQRMRWFE RGYGSGRLVD CDSFGADRL