Gene Rsph17025_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0905 
Symbol 
ID5083383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp925274 
End bp926065 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID640482463 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_001167113 
Protein GI146276954 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0323401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0583058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCATGG CTGACGGTTG GGAAGAGACC TCCGTCCTCA GCGTCGCGGA CCGGCTGGCG 
GCCGAGGCGC TGATCGTCGA TGTCGAGGGG TTCGAGGGCC CGCTCGACCT GCTTCTGACG
CTCTCGCGCA CGCAGAAGGT GGACCTGCGC CGGATCTCGG TCCTGAAGCT GGCCGAGCAG
TATCTGCTGT TCGTGACCCA CGCCAGGCAA CTGCGGATCG AGCTTGCGGC CGATTATCTC
GTGATGGCGG CCTGGCTCGC CTATCTGAAA AGCCGGCTGC TGCTGCCCCC CGACCCGACC
GAGGAGGGGC CTTCGGCCGA GGAACTGGCC GCGCATCTGG CCTTTCAGCT CGAACGGCTC
GAGGCGATGC GGGACGCCGC CGCCCGGCTC ATGGCGCGCG ACCAGAAGGG GCGGGACTTC
TTCGCCCGCG GCCTGCCCGA GGATGTCACG CGCCACCGAC AGATCAGCTA CACGGTCACC
CTCATCGACC TGATGCGCGC CTATGCCCGC ATCCGCACCC GCGACGAGTT CCGCCCCTTC
GTGATGGACC GCCACCATGT CTTCACCATG GAACAGGCGC TGGAGCGGAT GCGCGGAATG
CTCGGCTGGT TCGGCGACTG GGGCGAGCTG ACCTCGTATC TGCCCGAGGG CTGGGACGGC
CATCCGATGC GCCGCCGCTC GGCCACCGCG GCCCATTTCG CGGCGATCCT CGAGATGACC
AAGCGCGGCC AGATCGAGGT CCGACAGGGC GAGACCTTCG CCCCCATCCT GATCCGCAGG
AAGGAAGGCT GA
 
Protein sequence
MCMADGWEET SVLSVADRLA AEALIVDVEG FEGPLDLLLT LSRTQKVDLR RISVLKLAEQ 
YLLFVTHARQ LRIELAADYL VMAAWLAYLK SRLLLPPDPT EEGPSAEELA AHLAFQLERL
EAMRDAAARL MARDQKGRDF FARGLPEDVT RHRQISYTVT LIDLMRAYAR IRTRDEFRPF
VMDRHHVFTM EQALERMRGM LGWFGDWGEL TSYLPEGWDG HPMRRRSATA AHFAAILEMT
KRGQIEVRQG ETFAPILIRR KEG