| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0887 |
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| Symbol | |
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| ID | 5083613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 904019 |
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| End bp | 905500 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640482444 |
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| Product | protease Do |
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| Protein accession | YP_001167095 |
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| Protein GI | 146276936 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0626906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.172287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGTCTC ACGCCATTTC CATCGCCCGC CGGAAGGAAC CGGTGCCCAT CGCCGCATGG
CGCCTTTTCC TCGCGCTGAT GCTGGGCCTG GGGCTGGCGC TTGCGCAGGC GGTGTCGGCC
CATGCGCAGG GGGCCCCGGC CAGCTTCGCC GGTCTCGCCG AAAAGATCAG CCCGGCGGTG
GTGAACATCA CCACCTCGAC CGTTGTCGCG GCACCCACGC AGAGTTCTCC GCTCGTGCCC
GAAGGCTCGC CCTTCGAGGA TTTCTTCCGC GACTTCATGG ACCCGCAGAA CCGCGAAGGT
GGACCGCGCC GCTCCGAGGC GCTGGGCTCG GGCTTCGTGA TCTCGGAAGA CGGCTTCATC
GTGACCAACA ACCATGTCAT CGAAGGGGCG GACGACATCC AGATCGAGTT CTTCTCGGGC
AACAAGCTCG AGGCGAAGCT CGTGGGCACC GATCCCAAGA CCGACATCGC CCTGCTCAAG
GTCTCGAGCA ACCAGCCGCT CCCGTTCGTG AGCTTCGGCA ACTCGGATCT CGCGCGGGTG
GGCGACTGGG TGGTGGCGAT GGGCAACCCT CTGGGGCAGG GCTTTTCGGT CTCGGCCGGG
ATCATCTCGG CGCGCAACCG GGCGCTCTCG GGCACCTACG ATGACTACAT CCAGACCGAC
GCCGCCATCA ACCGCGGCAA CTCGGGCGGG CCGCTGTTCA ATCTCGACGG TCAGGTGATC
GGCGTGAACA CGGCGATCCT CTCGCCCAAC GGCGGCTCGA TCGGGATCGG CTTCTCGATG
GCCTCGAACG TGGTGGTGAA GGTCGTCCAG CAACTTCGCG AGTTCGGCGA GACGCGGCGC
GGCTGGCTCG GCGTGCGGAT CCAGGACGTG ACCCCGGACG TGGCCGAGGC GATGGGGCTG
GCCGAGGCGA AGGGGGCGCT GGTGACGGAC GTGCCCGACG GGCCTGCGAA AGAGGCCGGA
ATGCAGTCGG GCGACGTGAT CGTGACCTTT GACAAGGCGC CGGTGGCCGA CACCCGCGAT
CTCGTGCGCC GCGTGGCGGA CGCCCCGATC GGTGAGGCCG TGCGCGTGGT CGTGATGCGT
GAAGGCAAGA CCCGCACGCT CTCCGTGGTG CTCGGGCGCC GGGAGGAAGC CGAGGGTGAG
GGCCCGGCGG CGTCCGTCGA GTCTGCCCCG ACGGAACCTT CGACCGCCAA CCTTCTGGGC
CTGACAGTGG CTCCGCTGAC GGCCGAGCAG GCCGCCGAGC TGGGTCTGCC GCCCGGCACC
GAGGGGCTCG CGGTGACGGA TGTGGACACG GCCTCCGAGG CCTATTCCAA GGGGCTGCGC
GAGGGGGATG TCATCACCGA GGCGGGTCAG CAGAAGGTCA TGACGATCAA GGATCTCCAG
GACCGCGTGG ACGAGGCCCG CGAGGCCGGG CGCAAGTCGC TCCTGCTTCT AATCCGACGG
GGCGGTGACC CACGCTTCGT GGCTCTCACG ATCACCGAAT GA
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| Protein sequence | MQSHAISIAR RKEPVPIAAW RLFLALMLGL GLALAQAVSA HAQGAPASFA GLAEKISPAV
VNITTSTVVA APTQSSPLVP EGSPFEDFFR DFMDPQNREG GPRRSEALGS GFVISEDGFI
VTNNHVIEGA DDIQIEFFSG NKLEAKLVGT DPKTDIALLK VSSNQPLPFV SFGNSDLARV
GDWVVAMGNP LGQGFSVSAG IISARNRALS GTYDDYIQTD AAINRGNSGG PLFNLDGQVI
GVNTAILSPN GGSIGIGFSM ASNVVVKVVQ QLREFGETRR GWLGVRIQDV TPDVAEAMGL
AEAKGALVTD VPDGPAKEAG MQSGDVIVTF DKAPVADTRD LVRRVADAPI GEAVRVVVMR
EGKTRTLSVV LGRREEAEGE GPAASVESAP TEPSTANLLG LTVAPLTAEQ AAELGLPPGT
EGLAVTDVDT ASEAYSKGLR EGDVITEAGQ QKVMTIKDLQ DRVDEAREAG RKSLLLLIRR
GGDPRFVALT ITE
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