| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0886 |
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| Symbol | |
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| ID | 5083612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 902851 |
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| End bp | 903873 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640482443 |
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| Product | HflC protein |
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| Protein accession | YP_001167094 |
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| Protein GI | 146276935 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.340526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCA GCTCACTCAT ACTGCCCATC CTCGCGATCC TGGTGGCGAT CGGCTTCTCG
TCGATCTTCA TCGTGGACGA ACGCGAGAAG GCGCTGGTCC TGCAGTTCGG CCAGGTGAAG
GCGGTCAAGG AAGAGCCGGG CATCGGCTTC AAGATCCCGC TCATCCAGGA GGTCGTGCGC
TATGACGGCC GCATCCTCGG CCTGCCGACG CAGCCCATCG AGGTGACGCC CCTCGACGAC
CGACGTCTCG TTGTGGACGC CTTCGCGCGC TGGCGCATCG TCGATGTGGT CGAGTTCCGC
GAGGCCGTGG GCGTCGGCGG CATCGACGCC GCCCAGACGC GCCTCCAGCG CATCATGAGC
CCGGCGATCC GTGAAGTGCT CGGCGGCGTG CCCTCGATCC GGGTGCTGTC CGAGGACCGG
ACGGTGCTGA TGAACCAGAT CCGCGACCTC GCCCGCCGTC AGGCACAGGC GCTGGGGGTG
GATGTCATCG ACGTGCGTCT GACGCGCACC GACCTGCCCG AGCAGAACCT TGCGGCCACC
TATGGCCGGA TGCGGGCCGA GCGCGAGCGT GAGGCCGCCG ACGAAATCGC CCGAGGCAAC
GAGGCGGCGC AGCGCGTGCG TGCGGCGGCG GACCGGACGG TGGTCGAGGT CACATCGGAA
GCGCGGCGTC TGGCCGAGGT GATCCGCGGT GAGGCCGATG CGCAGCGCAA CGGGATCTAC
GCCAACGCCT TCGGCCGCGA TCCCGAGTTC TTCGCCTTCA CCCGGTCGCT CACCTCCTAC
GAGCGGGCGC TGCAATCGGG CAGCTCGTCG ATCGTGATGC AGCCGGACAG CGACTTCTTC
CAGTATCTGC GCACCGACCG CGCCCCCGAA GGCGGTCCCT TGGCCGCGGC CCCCGCCCAA
GCCGCGCCGG CCGGTGACGG AGAGGCGGCC GCGGGCGAAG AGCCGGGCGA TCAGGTCGGC
TCGCCGGCCG GTCAGCCGAC GGCCGCTGCG CCTGCCGCCC CGGCCCCCGC GGCGGCCCAG
TGA
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| Protein sequence | MNRSSLILPI LAILVAIGFS SIFIVDEREK ALVLQFGQVK AVKEEPGIGF KIPLIQEVVR
YDGRILGLPT QPIEVTPLDD RRLVVDAFAR WRIVDVVEFR EAVGVGGIDA AQTRLQRIMS
PAIREVLGGV PSIRVLSEDR TVLMNQIRDL ARRQAQALGV DVIDVRLTRT DLPEQNLAAT
YGRMRAERER EAADEIARGN EAAQRVRAAA DRTVVEVTSE ARRLAEVIRG EADAQRNGIY
ANAFGRDPEF FAFTRSLTSY ERALQSGSSS IVMQPDSDFF QYLRTDRAPE GGPLAAAPAQ
AAPAGDGEAA AGEEPGDQVG SPAGQPTAAA PAAPAPAAAQ
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