Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0879 |
Symbol | |
ID | 5083605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 895951 |
End bp | 896655 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640482436 |
Product | thiamine pyrophosphokinase |
Protein accession | YP_001167087 |
Protein GI | 146276928 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1564] Thiamine pyrophosphokinase |
TIGRFAM ID | [TIGR01378] thiamine pyrophosphokinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGATGA CCCGGCCCAT TGTTGAATCG ACCGAAGGCG TCACGCTGGT GGCGGGCGGA CCCGTCACGC GGCGCGATCT TTCCGTGGCG CTGGCGCGGG CGCCGGTGCT GGTGGCGGCG GATGGCGGTG GCGACAGCGC CCTGCGTCTC GGCCGGCTGC CCCAGGCGGT GATCGGGGAC ATGGACTCGC TGTCCCACGA GGGGCGCGAG GCACTCCGCG GCCGTGTGCA TCACCTGCCG GAACAGGAAA CCACCGATTT CGACAAGTGC CTGCGCAGCA TTCGCGCGCC CTTCGTGCTG GCGCTGGGTG TGGCGGGGGC GCGGATCGAC CACGGGCTTG CGGTGATGAA CGTGCTCGTC CGCCGGACCG AACCGGTCTG CCTGCTGGTC GGGCCGCAGG ACGTGGTGTT CCATGCGCCG CCCGAACTCA GGCTGCGGCT GAAGGTCGGC GAGCGGATCT CGCTCTTTCC GCTCGGGCCG GTCACCGGCG AAAGCCGGGG GCTGCGCTGG CCGATCGACG GCATCCCTTT CGCGCCGGAC GGGCGGGTGG GCACCTCGAA CGCCGTGGCC GAGCCCGAGG TGCGGCTGGC GTTCGACGGG CCGGGAATGC TGGTCATCCT GCCGCGCGCG CGCCTCGACC GCGCGCTCAG GGCGCTGGTG CCGGGGTGGC GGGCAGGCGC GACGACAGCC GCTCGCGGTA GATGA
|
Protein sequence | MQMTRPIVES TEGVTLVAGG PVTRRDLSVA LARAPVLVAA DGGGDSALRL GRLPQAVIGD MDSLSHEGRE ALRGRVHHLP EQETTDFDKC LRSIRAPFVL ALGVAGARID HGLAVMNVLV RRTEPVCLLV GPQDVVFHAP PELRLRLKVG ERISLFPLGP VTGESRGLRW PIDGIPFAPD GRVGTSNAVA EPEVRLAFDG PGMLVILPRA RLDRALRALV PGWRAGATTA ARGR
|
| |