| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0869 |
|---|
| Symbol | |
|---|
| ID | 5083595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 886334 |
|---|
| End bp | 887059 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640482426 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001167077 |
|---|
| Protein GI | 146276918 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC TGATCCTGAC CACCGCGCTT CTGGCGCTGG CCGCGGGCAC GGCCGCCGCG
CAACAGACCG TGCGCATGGG CACCGAGGGC GCCTACCCTC CCTACAACTT CATCAACGAC
AAGGGCGAGG TGGACGGCTA CGAGCGCGAG CTGGGCGATG AGCTGTGCAA GCGCGCGAAC
CTCACCTGCA CCTGGGTGAA GAACGAGTGG GACAGCATCA TCCCCAACCT GCAGTCCGGC
AACTATGACA CGATCATGGC CGGGATGAGC ATCACCGAAG AGCGGGAAGA GGTCATCGAC
TTCACCCAGA ACTACATCCC GCCGCTGGCC TCGGCCTATG CCGCGATTTC GCCCGACGCC
GACATCGAGG GCGGCGTGGT GGCGGCGCAG ACCGGCACGA TCCAGGCGAG CCATGTGGCC
GAGAGCGGCG CGACGCTGCT CGAGTTCGCC ACCGGCGAAG AGACCGTGGC GGCGGTGCGC
AACGGCGAGG CCGACGCGGT CTTCGCAGAC AAGGACTTCC TCGTGCCCTT CGTCAACGAG
TCGAACGGCG AGTTCACCTT CGTGGGCGAG GACGTGCCGC TGGGCGGCGG CGTGGGCATG
GGCGTTCGCA AGTCCGACAC CGAGCTGAAG GAAAAGTTCA ACGCGGCCAT CCAGTCCATG
AAGGACGACG GCACGATCAA CGCCATGATC CGCAAGTGGT TCGGCGACGA GATCCAGACC
TTCTGA
|
|---|
| Protein sequence | MKKLILTTAL LALAAGTAAA QQTVRMGTEG AYPPYNFIND KGEVDGYERE LGDELCKRAN
LTCTWVKNEW DSIIPNLQSG NYDTIMAGMS ITEEREEVID FTQNYIPPLA SAYAAISPDA
DIEGGVVAAQ TGTIQASHVA ESGATLLEFA TGEETVAAVR NGEADAVFAD KDFLVPFVNE
SNGEFTFVGE DVPLGGGVGM GVRKSDTELK EKFNAAIQSM KDDGTINAMI RKWFGDEIQT
F
|
|---|
| |