| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0863 |
|---|
| Symbol | |
|---|
| ID | 5083589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 879850 |
|---|
| End bp | 881151 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640482420 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001167071 |
|---|
| Protein GI | 146276912 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGC TCTATGCCAA CGACCGGCCG GGGGAATATC CCCGCTCCTG GTATGCGGCC
ACCGCGGCCG ATCTTGCCCC CTTCCCCGCG CTGGAGGGCG AGGTGCGGGC CGATGTCTGC
GTCGTGGGGG CCGGATATAC GGGCCTCTCG GCCGCGCTGC ATCTGGCCGA GCGCGGCTAT
TCGGTGGTTC TGCTCGAGGC GCATCGGGTG GGCTTTGGCG CCTCGGGGCG CAACGGCGGG
CAGGTGGGCT CGGGCCAGCG GCTCGAGCAG GACGAGCTTG AGGCAATGGT GGGCCTCGAC
GATGCGCGGA AGCTCTGGGA TCTGGGCGAG GAAGCCAAGG CGCTGGTCCG CGATCTCATC
CTCCGCCACG ACATGCCGGT CACCTTCCAT CCGGGCATTG CCCACGCCTG CCGCAAGCTT
TCGGAGGTGG CCCACGCCCA CGCTTATGCC GAGAAGCTTG TCCGCGACTA CGGCTATGAC
CGGATCGAGC CGCTCGACCG GGACGGGATC CGCCGCCTGA TCGGCTCGGA GGCCTATGTC
GGCGGGGACA TCGACCGCGG GGCCGGCCAT CTCCATCCGC TGAACTACGC CATCGGCCTG
GCCCGCGCCT GCGTTGCGGC GGGCGTGCGG ATCTGCGAGC GGAGCCCGGT GACGCGGGTC
CTTCATGGCG CCGAGCCTGT GGTCGAGACC GCCGCGGGGC GCGTGCGCGC CGCCCAGGTC
GTGCTGGCCG CGAACGGCTA CCTCGGCCGC CTCGAACCCT CGGTTGCCGC CCGCGTGATG
CCGATCAACA ACTTCATCCT GACGACCGAA CCGCTGGGCT CCCTCGCGAC CGAGGTTCTT
TCGGAACCCG TGGCGGTGGC GGACACGCGC TTCGTCGTGA ACTACTGGCG GCTGTCCGAG
GACGGGCGAC TGCTGTTCGG CGGCGGCGAG AGCTACGGAT ACCGCTTCCC CGACATCGAG
CGGACCGTGC GGAAGCCCAT GCTCGAGGTC TATCCGCAGC TGCGCGACGT GCGGATCACC
CATGCGTGGG GCGGCACGCT CGCCATTACC ATGAACCGGC TGCCCTGCTT CACGCGGGTG
ACACCCAACA TCCTGTCAGC CTCGGGCTAT TCGGGACACG GGGTGGCGAT GGCGACGCTC
GCAGGGCGGC TGATTGCGGA AGCGGTGGCA GGTCAGGCCG AGCGGTTCGA TCTGATGACA
GGCTTGCCGC AGCCCCGCTT TCCCGGCGGC GCTGCGCTGC GCTGGCCGAT GCTGGTGCTG
GCGATGACCT GGTATTCCCT CCGCGATCGG CTGGGGATCT GA
|
|---|
| Protein sequence | MNLLYANDRP GEYPRSWYAA TAADLAPFPA LEGEVRADVC VVGAGYTGLS AALHLAERGY
SVVLLEAHRV GFGASGRNGG QVGSGQRLEQ DELEAMVGLD DARKLWDLGE EAKALVRDLI
LRHDMPVTFH PGIAHACRKL SEVAHAHAYA EKLVRDYGYD RIEPLDRDGI RRLIGSEAYV
GGDIDRGAGH LHPLNYAIGL ARACVAAGVR ICERSPVTRV LHGAEPVVET AAGRVRAAQV
VLAANGYLGR LEPSVAARVM PINNFILTTE PLGSLATEVL SEPVAVADTR FVVNYWRLSE
DGRLLFGGGE SYGYRFPDIE RTVRKPMLEV YPQLRDVRIT HAWGGTLAIT MNRLPCFTRV
TPNILSASGY SGHGVAMATL AGRLIAEAVA GQAERFDLMT GLPQPRFPGG AALRWPMLVL
AMTWYSLRDR LGI
|
|---|
| |