| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0844 |
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| Symbol | |
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| ID | 5084950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 864129 |
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| End bp | 865199 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640482402 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001167053 |
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| Protein GI | 146276894 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCATG CGCTGCGGCT GGGCGCGCGG GGCCTCGGGC GGACCTGGCC CAACCCGGCG
GTGGGCTGCG TGATCGTGAA GGCGGGGCGC GTGGTGGGCC GCGGCTGGAC CCGTCCCGGC
GGGCGCCCCC ACGCCGAGCC TGTGGCGCTG GCCGAGGCCG GGGCCGCGGC GTTGGGGGCC
ACGGCCTATG TCACGCTCGA GCCCTGCGCG CATCATGGGC GGACGCCGCC CTGCGCCGAG
GCGCTTGCCG CCGCCGGGGT CGCCCGTGTG GTGACGGCCA CCGGCGATCC CGATCCGCGC
GTTGCGGGCC GCGGGCACGC CCTGCTGCAC GCGGCGGGAA TTGCCGTGAC CGAAGGTGTT
CTCGAGGCGG AGGCGCGCGC GGCCAACGCG GGGTTCCTGA AGCGCGTGAC CCTTGGGCTG
CCCTTCGTCA CGCTGAAGCT GGCGGCGAGC GTTGATGGGC GCATCGCCAC CGCCTCGGGC
GAGAGCCGCT GGATCACGGG GGCGCATGCG CGGCGGGCCG TTCATGCGAT GCGAATGCGG
CATGATGCGG TGATGGTGGG CGTGGGAACG GCGCTGGCCG ACGACCCCGA CCTCTCCGTG
CGAGACCTGG GGGCGGCGCA CCAGCCGGTG CGGATCGTGG TGGACAGCCT CCTGCGCCAT
TCCTGCGACA GCCGCCTGGG GCGGACCGCG CGGCATGTGC CGGTCTGGCT CTGCCACGGG
CCGGATGCGC CCGAAGCCGC GCGGGCCGGC TGGCGGGCGG CGGGTGCGCT CCTGCTCGAA
TGCGAGGCGG GGCCGGACGG GCTCGATCCG GCCGCGGTGA TGCGGCGCCT GGCGTCCGAA
GGGCTGACGC GCATCTTCTG CGAGGGGGGC GCGCGGCTCG GCGCGGCCCT GGTGCGGGCC
GGCCTCTGCG ACGAGCTTGT GTCCTTTACG GCCGGCAAGC TGATCGGCGA GGAGGGACGC
GGCGCGATGG GGCCCTTGCG GCTGGCGCAG CTTGCCGCGG CGCCGGCCTT CCGGCTGGCC
TCGGTCGAGA CGGTGGGCGT GGATCTTCTG GCGCGCTGGC GGCCGCTCTG A
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| Protein sequence | MAHALRLGAR GLGRTWPNPA VGCVIVKAGR VVGRGWTRPG GRPHAEPVAL AEAGAAALGA
TAYVTLEPCA HHGRTPPCAE ALAAAGVARV VTATGDPDPR VAGRGHALLH AAGIAVTEGV
LEAEARAANA GFLKRVTLGL PFVTLKLAAS VDGRIATASG ESRWITGAHA RRAVHAMRMR
HDAVMVGVGT ALADDPDLSV RDLGAAHQPV RIVVDSLLRH SCDSRLGRTA RHVPVWLCHG
PDAPEAARAG WRAAGALLLE CEAGPDGLDP AAVMRRLASE GLTRIFCEGG ARLGAALVRA
GLCDELVSFT AGKLIGEEGR GAMGPLRLAQ LAAAPAFRLA SVETVGVDLL ARWRPL
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