| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0836 |
|---|
| Symbol | |
|---|
| ID | 5084942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 854166 |
|---|
| End bp | 854741 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640482394 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001167045 |
|---|
| Protein GI | 146276886 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4961] Flp pilus assembly protein TadG |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.389481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.670982 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGACC GTCTGTTCCG CCCCTTCCGC CGCGACGAAA GCGGCACCGC GGTGGTCGAG
CTGGTGCTTG TCCTGCCGAT CATGCTGTGG GCCTATCTCG CGCTCTTCAC CTACTGGGAC
GCCTACCGCG TGCTCAACAC CACGCAGAAG GCCAGCTACA CGATCGCCGA CATGATCTCG
CGCTTCGACA CGCTGGACCC TGCGGACTTT CCGGGGATGC AGGACGTTCT CGAATACATG
ATCGGCGACC GCGAAGGGGC GAAGATGCGG ATCACCGCCG TCGTCTGGAG CGACAAGGAC
AAGCGGTTCA ACGTCCAGTG GTCCTGCTCT CCGGGCAAGG CGAAATCGGT CTGGACCACC
GCCCTCCTCA ATGCCGACAC CGGGATCAAG GGGCGCATCC CCTCGCTGGA TGATGGCGAA
TGGTCGGTGA TCGTCGAGAC CTGGGTCGAT TTCGTGCCCG CGATGGATCT CAGTTCGCTG
CCGGTCTCGA CCCCGCTCGA ACCGCGGACC TTTCACCAGT TCATCGCCAC CCGTCCGCGT
CCGGGCAAGA CCAACCTCAC GAAGAGCTGT CTGTGA
|
|---|
| Protein sequence | MMDRLFRPFR RDESGTAVVE LVLVLPIMLW AYLALFTYWD AYRVLNTTQK ASYTIADMIS
RFDTLDPADF PGMQDVLEYM IGDREGAKMR ITAVVWSDKD KRFNVQWSCS PGKAKSVWTT
ALLNADTGIK GRIPSLDDGE WSVIVETWVD FVPAMDLSSL PVSTPLEPRT FHQFIATRPR
PGKTNLTKSC L
|
|---|
| |