Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0835 |
Symbol | |
ID | 5084941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 853580 |
End bp | 854185 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640482393 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001167044 |
Protein GI | 146276885 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.861936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.897725 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACGCA AGGCAGGATC CCACGCCGAA ACGACAGGCC CGCGCGTGCG CGCGGCGGCC CAGACCCTGA TCGCGCGCCA CGGCTATGCG GCCGTCTCGA TGCGCCAGAT CGCGGCCGAG GTGGGGGTGC AGGCCGGGGC CCTCTACCTC TACACGCCCG ACAAGCAGAC GCTGCTCTTC GACCTCATGC GGCTGCACAT GGAGGAACTG CTGGCCGCCT ATGAGGCGCT TGCCGTGCCC CGCGACCCGC GCGAGGCGCT GGCCCGGTTT GCCCGGTTCC ACATCGGCTA TCACATCGAC CGGCCCGAGG CGGTCTTCAT CGCCTACATG GAACTGCGGA ACCTGAGCCC CGAGAACTTC GCCGAGATCG AGCGGCTCCG GCGGCGCTAT GAGCGGCATC TCGAGGCGAT CCTCGAGCGG GGGGCCGCCG AACGCGTCTT TGACCTGCCC GACGTGAGGC TCGCCTCGCT CGCGCTGATC GCCATGCTGA CGGGCGTGAC GAACTGGTAT CGCGAAGGCG GGCGTCTGGG CCGCGAGGAG GTGCAGGCGA TCTACGCCGA CATGGCGCTG AAGGCGGTGG CCGCCGTCAC AGACAGCTCT TCGTGA
|
Protein sequence | MARKAGSHAE TTGPRVRAAA QTLIARHGYA AVSMRQIAAE VGVQAGALYL YTPDKQTLLF DLMRLHMEEL LAAYEALAVP RDPREALARF ARFHIGYHID RPEAVFIAYM ELRNLSPENF AEIERLRRRY ERHLEAILER GAAERVFDLP DVRLASLALI AMLTGVTNWY REGGRLGREE VQAIYADMAL KAVAAVTDSS S
|
| |