Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0821 |
Symbol | |
ID | 5084927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 837289 |
End bp | 838008 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640482377 |
Product | threonyl/alanyl tRNA synthetase, SAD |
Protein accession | YP_001167030 |
Protein GI | 146276871 |
COG category | [R] General function prediction only |
COG ID | [COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.35351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAGC CACTTTTTTG CACCGATCCC TACCTGCGCG AGGCCGAAGC CCGCGTCACC GGCCACACCG CCGAGGGGGG CATCCTGATC GACCGCTCGA TCTTCTATCC GACGGGCGGC GGGCAGCCCG GCGACAGCGG CTGTCTCGTG TGGGAGGGCG GCCGGATTCC GATCGCCACC GCGATCAAGG CCGAGGGCGG GCGCGTCGCG CTGGTGCCGG CCGAGGCCGC GGCGCTGCCG CCCGAGGGCG CGCCGGTTCG CCAGATCCTC GACTGGGACC GGCGGCACCG GCACATGCGC GTGCATACGG CGCTGCATCT GCTGTCGGTG GTGATCCCTC TGCCGGTGAC GGGTGGCCAG ATCGGGGCCG AGCGTGGCCG GCTCGACTTC GACATGCCCG AGCCGCCGGC CGATGTGGCC GCGCTCGAAG AGGCGCTGAA CGCGCTGGTC GGGCGTGACC TGCCGGTGTC CGAGGACTGG ATCACCGACG CGGAGCTTCT GGCCGATCCC TCGATCGTCA AGACCATGTC GGTGATGCCG CCCACGGGGC AGGGCCGGGT GCGGCTCGTC CGCATCGGGC AGGGGGCGGA TCAGGTGGAC CTCCAGCCCT GCGGCGGCAC CCATGTCGCG CGCACCGGCG AGATCGGACG GGTGGCGATC GGCAAGATCG AGAAGAAGGG CCGGCAGAAC CGCCGCGTGA CCCTCGCGCT GGCCGACTGA
|
Protein sequence | MTEPLFCTDP YLREAEARVT GHTAEGGILI DRSIFYPTGG GQPGDSGCLV WEGGRIPIAT AIKAEGGRVA LVPAEAAALP PEGAPVRQIL DWDRRHRHMR VHTALHLLSV VIPLPVTGGQ IGAERGRLDF DMPEPPADVA ALEEALNALV GRDLPVSEDW ITDAELLADP SIVKTMSVMP PTGQGRVRLV RIGQGADQVD LQPCGGTHVA RTGEIGRVAI GKIEKKGRQN RRVTLALAD
|
| |