Gene Rsph17025_0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0821 
Symbol 
ID5084927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp837289 
End bp838008 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content72% 
IMG OID640482377 
Productthreonyl/alanyl tRNA synthetase, SAD 
Protein accessionYP_001167030 
Protein GI146276871 
COG category[R] General function prediction only 
COG ID[COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.35351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CACTTTTTTG CACCGATCCC TACCTGCGCG AGGCCGAAGC CCGCGTCACC 
GGCCACACCG CCGAGGGGGG CATCCTGATC GACCGCTCGA TCTTCTATCC GACGGGCGGC
GGGCAGCCCG GCGACAGCGG CTGTCTCGTG TGGGAGGGCG GCCGGATTCC GATCGCCACC
GCGATCAAGG CCGAGGGCGG GCGCGTCGCG CTGGTGCCGG CCGAGGCCGC GGCGCTGCCG
CCCGAGGGCG CGCCGGTTCG CCAGATCCTC GACTGGGACC GGCGGCACCG GCACATGCGC
GTGCATACGG CGCTGCATCT GCTGTCGGTG GTGATCCCTC TGCCGGTGAC GGGTGGCCAG
ATCGGGGCCG AGCGTGGCCG GCTCGACTTC GACATGCCCG AGCCGCCGGC CGATGTGGCC
GCGCTCGAAG AGGCGCTGAA CGCGCTGGTC GGGCGTGACC TGCCGGTGTC CGAGGACTGG
ATCACCGACG CGGAGCTTCT GGCCGATCCC TCGATCGTCA AGACCATGTC GGTGATGCCG
CCCACGGGGC AGGGCCGGGT GCGGCTCGTC CGCATCGGGC AGGGGGCGGA TCAGGTGGAC
CTCCAGCCCT GCGGCGGCAC CCATGTCGCG CGCACCGGCG AGATCGGACG GGTGGCGATC
GGCAAGATCG AGAAGAAGGG CCGGCAGAAC CGCCGCGTGA CCCTCGCGCT GGCCGACTGA
 
Protein sequence
MTEPLFCTDP YLREAEARVT GHTAEGGILI DRSIFYPTGG GQPGDSGCLV WEGGRIPIAT 
AIKAEGGRVA LVPAEAAALP PEGAPVRQIL DWDRRHRHMR VHTALHLLSV VIPLPVTGGQ
IGAERGRLDF DMPEPPADVA ALEEALNALV GRDLPVSEDW ITDAELLADP SIVKTMSVMP
PTGQGRVRLV RIGQGADQVD LQPCGGTHVA RTGEIGRVAI GKIEKKGRQN RRVTLALAD