| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0820 |
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| Symbol | |
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| ID | 5084926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 834740 |
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| End bp | 837289 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640482376 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001167029 |
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| Protein GI | 146276870 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0343003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATCC TGCGCGTGAT GCCTGTCCTG CTGCTGTGGG TGATGTTCGC CTGCGCGAGC
CTGCCGCTCT GGTCTCCGGA CCGGGCCGTG GCCCAGGAGA TGGTCGGCCC GGCCGCCGGC
GCCGACGAGA TGAAGGCGCC GGACTACAGG CAGTGGGAGA AGACCGCCAC GCGGGCCGAG
CGCGAGATCG CCGACCGCGA GACCGAGAGC GCGTCCTACG AGATGATGCG CGGCTACCTC
GTGCAATGGC GCGACACGTT CCTCGGGGCG CAGGGGCTGA ACGCCAGCCG CATCGCCTCG
GTGCGCAGCC AGCTCGACGC GCTCGGGCCG GCGCCCGCCG AGGGCGAAAC CGAACCCGAC
GACATCGCGC AACGCCGCCG CGAGCTGACT GCGCAGGTGG CCGAGCTTCG GGCGCCGGTC
CTGGCCGCCG AAGAGGCCTA CCAGCGCGCG GACGGCCTGA TCCGCGAGAT CGACCGCGTG
GTACGCGAAC GTCAGACCGA AGAGCTGCTG CGCATCTGGC CCATGCCGCT CAACCCCGCC
AACTGGCCGA GCGCCGCCGC CGAGGTGTCG GGCCTCGCCG TGGATCTCTG GGACGAGGGC
TCGGGTCGCG TCAACTCGCC CGCCGCGCAA TCGACCACGC GGGACAACCT GCCCGCGATC
CTCGGCCTGC TGGCCGTGGG GCTGCTGCTC ATGGCGCGCG GGCGCTCGCT GATGGAGCGG
CTGACGCAGC AGCTGCAGGA TCAGGCCTCG GCGCGGGGGC GCAAGGTGAC CTCGCTCCTG
GTCTCGCTGG GGCAGATCGC GGCTCCGGTG GCGGGCGTCG TGGCGGTGAG CCACGCGATC
ACGCTCTCCG GGCTGGCGGG GCCGCGCACG ACGCTGATCG TCGAGGCCCT GCCGGCCGTG
GGCTTCATCC TCTATTCGGC GGGGTGGCTC GCCGGCCGGA TCTTTCCCAA GAACGGCCAG
CAGACCTCGC CCCTGAACCT CTCGGTCGAG CGCCGGCGCG AGGGGCGCTT CCACACGGCC
ATGTTCGGCG TGGTGCTGGC GCTCGACGGG TTGCGCAGCG TGGCGCTGCC GCCCGCGCGG
GTGGGCGAGG CCGCAACCTC GGTCATGGCC TTCCCCATGA TCGTCCTTGC GGGCGTCGTC
CTGTTCCGCA TCGGCCAGCT GATGCTGGCC AGCGTCCGCA ACGATCTGGG CGACGACGAA
CCCACGAGCT TTCGCAACAG CGTCATCGAC CTGCTCGGGC GCGGCGCCAT CGCCATCGGC
GTGATCGGCC CGCTGCTGGC GGCGCCGGGC TACATCGCGG CGGCCACGGC GCTGGTCTAT
CCGGCGGGCA TCACCCTCGG GCTGATCGGG CTGCTCTTCG TGCTGCAGAC GCTGGTGGTG
GACCTCTATG GCCTTGCCAC CCGCAACGAG GAGGGCGGGC GCGACGCGCT TCTGCCGGTG
CTGATCGGCT TCCTGCTTGC GCTGGCCATG GTGCCGCTGC TGGCGCTGGT CTGGGGCGCG
CGCGTGGCCG ACCTGACCGA GATCTGGGCC CGCTTCCGCG AGGGCTATCA GGTCGGTTCG
ACCCGCATCT CGCCCACGAA CTTCCTGCTC CTCGCCATCG TCTTCTCGAT CGGCTACGGC
ATCACCCGCC TGCTGCAGGG CGCCCTCAAG AGCCAGATCC TGCCCAAGAC GCGGCTCGAT
CAGGGCGGGC GCAACGCGGT CGTCTCGGGG GTGGGCTACC TCGGCATCAT CCTTGCGGCC
CTTGTCGCGG TCAATTCCGC GGGCCTCGAC CTGTCGAACC TCGCCATCGT CGCCGGTGCC
CTGTCGGTCG GCATCGGTTT CGGTCTCCAG AACATCGTCG GCAACTTCGT CTCGGGCATC
ATCCTGCTGA TCGAGCGCCC CGTCTCGGAG GGCGACTGGA TCGAGGTGGG CGGGGTGCAG
GGCACCGTCA AGTCGATCTC GGTCCGCTCG ACCCGGATCC AGACCTTCGA CCGAACCGAC
GTGATTGTGC CGAACCAGGA TCTCGTGGCC GGCCGGGTGA CGAACTGGAC CCGCTACAAC
ATGACCGGGC GGCTGATCGT GCCCGTCGGC GTGGCCTATG GCTGCGACAC CCGCAAGGTC
GAGCGCGTGC TGCGCGAGAT CGCCGAGGCC CAGCCGCTCG CGATCCTGAA CCCGCCGCCT
TCGGTGGTCT TCATGGGCTT CACGCAGGAG TTCATGAGCT TCGAGATCCG GGTGATCCTG
CGCGACGTGA ACTTCTCGCT CTCGGTGCGC TCCGACATCA ACCACATGAT CGTGCAGAGA
TTCGCCGAAG AGGGGCTCCG GCTCACCCAC ATGACGCGCG AGGTCTGGCC GCCACAGCCG
GAAGAGCCGG AGGCCGAAGG GCTCGACGAG GAGGAGATGG CCGCCCTGCT GGCGCCTGCG
CCCCGGCAGA AGGACAATGT GCCAAAGGGC ACGAGCGCGG TCGATCCCCG CGCCGAGGAC
GAGGACGACC CCGACGACGA GCCGGACGGC GATGCGGACG CCGATGGCGC GACCGAGGGG
GGCGCCGAAG CAACCGGGAG CAACCGTTGA
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| Protein sequence | MPILRVMPVL LLWVMFACAS LPLWSPDRAV AQEMVGPAAG ADEMKAPDYR QWEKTATRAE
REIADRETES ASYEMMRGYL VQWRDTFLGA QGLNASRIAS VRSQLDALGP APAEGETEPD
DIAQRRRELT AQVAELRAPV LAAEEAYQRA DGLIREIDRV VRERQTEELL RIWPMPLNPA
NWPSAAAEVS GLAVDLWDEG SGRVNSPAAQ STTRDNLPAI LGLLAVGLLL MARGRSLMER
LTQQLQDQAS ARGRKVTSLL VSLGQIAAPV AGVVAVSHAI TLSGLAGPRT TLIVEALPAV
GFILYSAGWL AGRIFPKNGQ QTSPLNLSVE RRREGRFHTA MFGVVLALDG LRSVALPPAR
VGEAATSVMA FPMIVLAGVV LFRIGQLMLA SVRNDLGDDE PTSFRNSVID LLGRGAIAIG
VIGPLLAAPG YIAAATALVY PAGITLGLIG LLFVLQTLVV DLYGLATRNE EGGRDALLPV
LIGFLLALAM VPLLALVWGA RVADLTEIWA RFREGYQVGS TRISPTNFLL LAIVFSIGYG
ITRLLQGALK SQILPKTRLD QGGRNAVVSG VGYLGIILAA LVAVNSAGLD LSNLAIVAGA
LSVGIGFGLQ NIVGNFVSGI ILLIERPVSE GDWIEVGGVQ GTVKSISVRS TRIQTFDRTD
VIVPNQDLVA GRVTNWTRYN MTGRLIVPVG VAYGCDTRKV ERVLREIAEA QPLAILNPPP
SVVFMGFTQE FMSFEIRVIL RDVNFSLSVR SDINHMIVQR FAEEGLRLTH MTREVWPPQP
EEPEAEGLDE EEMAALLAPA PRQKDNVPKG TSAVDPRAED EDDPDDEPDG DADADGATEG
GAEATGSNR
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