Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0802 |
Symbol | |
ID | 5083493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 814150 |
End bp | 815166 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640482360 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_001167013 |
Protein GI | 146276854 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.890178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGATG TCGTGACTGT CGGTCTCGAT CTCGCGAAGA ACGTCTTCCA GGTTCACGGT GTGGATGGTG ATGGCCGGGT CGTCCTGCGT CGCAGGCTGC GGCGGGCGGA GGTGCTCAAG CTCTTCGGCT CGCTTCCGCC GTGCCTCGTC GGCATGGAAG CTTGCGCTTC GTCGCACTAC TGGGCGCGAG AGATCGGCCG GCTCGGCCAT GAGGTCAGGC TGATGCCGCC GGCTTACGTC AAGCCATATG TAAAGCGGGG CAAGACCGAT GCGTCCGATA CCGAGGCCAT CTGCGAAGCA GTCACGCGGC CGACCATGCG GTTCGTCGCG GTGAAGACCG AGGACCAGCA GGCGGTGCTG ATGCTGCACA AGGCGCGCGA GCTTCTGGTG CGCCAGCGGA CGATGCTGAC GAACGCGCTG CGGTCGCATC TGGCCGAACT GGGCATTGTT GCGGCACAGG GGCCGGAGGG GCTGAACCAG TTGAAGGCCC AGTTCGGCTC CGCCCGAGAC AGCCTGCCGG ATCATGCCGT TGCGGCCCTG AGCGCCCTGA TCACCCAGGC CGAAGGTCTG GTGGAGGAGG TGGATCGCCT GGAGCGCCGG ATCCTGGACT GGCACCGGAC GAACGACGCC AGCCGTCGGC TCGCCACCAT CCCCGGCATC GGCCCGATCA CCGCCAGCGC GATCGCGGCG AACGTCCCGG ACGCCAGCCT CTTCCGATCA GCCCGCCAGT TCGCGGCATG GCTTGGATTG ACACCGAGAG CGCATTCCAG TGGCGGCAAG GACCGCCAGA CCGGGATCAG CAAGCAGGGC GACGGATACA TCCGGCGTCT CCTGGTCTCC GGTGCGAGCG CCGTGCTGCG GTTCACGCGC CAAGGCGATC CGGGCAAGGC GTGGCTGCTG CAGCTGAAGG AGCGCAAGCG CCCGAAGGTC GTCGCCGTCG CCCAGGCCAA CAAGACCGCG CGCATCGCCT GGGCGCTCCT GCGCCGCAAC GAGATCTACG CGGCGCCGGC TCCATGA
|
Protein sequence | MSDVVTVGLD LAKNVFQVHG VDGDGRVVLR RRLRRAEVLK LFGSLPPCLV GMEACASSHY WAREIGRLGH EVRLMPPAYV KPYVKRGKTD ASDTEAICEA VTRPTMRFVA VKTEDQQAVL MLHKARELLV RQRTMLTNAL RSHLAELGIV AAQGPEGLNQ LKAQFGSARD SLPDHAVAAL SALITQAEGL VEEVDRLERR ILDWHRTNDA SRRLATIPGI GPITASAIAA NVPDASLFRS ARQFAAWLGL TPRAHSSGGK DRQTGISKQG DGYIRRLLVS GASAVLRFTR QGDPGKAWLL QLKERKRPKV VAVAQANKTA RIAWALLRRN EIYAAPAP
|
| |