Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0787 |
Symbol | |
ID | 5083478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 802715 |
End bp | 804364 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640482345 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001166998 |
Protein GI | 146276839 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.387629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTTC CGCAGGACCG CTGGGCCGGC TTGACGCCGT CGCCGGCCAC GGATGTGCCG CTGTCGCCCC TCACCTTCCT GCGCCGTGCG GCGCGGGTCT GGCCGGGGCA GGTCGCGGTG ATCGACGGTG ACCGACACTT CACCTGGGCC GAATACGCCG ACCGCTGCCG CCGGCTGGCC GGGGCGCTGA CCGCGCTTTC GGTCAAACCG GGGGACGTGG TGGCCGTGCT GGCGCCTAAC GTGCCGCTGA TCCTCGAGGC GCATTTCGGG GTGGCGCTGG CCGGGGCCGT GCTGAACCCG CTGAACACCC GGCTCGACGG GCCGGGACTG GCCTTCATCC TTGCCCACAG CGAGGCGAAG GTGCTGCTGG TCGACGCGAG CCTTGCCGCG CTTGCGGCCG AGGCGCTGGC GGGTCTTGGC CATCCGCCCG CGGTGCTGGT GGCCGGGGAA GGCCCGCCGC CCGCGGGGCT TCCGGGGGCG CATGACTACG AGGCGGCGCT GGCCGCGGCA GAGCCCGCGC CCTGGCGGCT GCCCGACTCC GAATGGGATC CGATCGCTGT CAACTACACC AGCGGCACCA CGGGCAATCC GAAGGGCGTG GTGCTGCATC ACCGCGGGGC CCATCTTGCC GCGCTGGCCA ATATGGCGGT GCTGGGCCTG CGCAGCGACA GCCGGTATCT CTGGACCCTG CCGGCCTTTC ACTGCAACGG CTGGAGCGGC ATCTGGGCCG CCGCCGCGGC GGGAACCACG CAGGTCTGCC TGCCGCGGGT CGATCCGGTG GCGATCCTGA ACCGGATCGA AGAGGCGGCG ATCACCCATC TCTGCGCCGC CCCGGTCGTG CTGACGATGA TCCTGAACAT CCGCGACGGC GTCCCCGAGC GCGGCCCCGG CAGCCGCCCG GTCATCATCG GCACCGGCGG AGCGGCCCCG ACCTCGGCCG TTCTGGCCGC CGCGGCGGCG CGGGGCTTCG ATGTGATCCA CATGTATGGC ATGACCGAAA GCTACGGCCC CACCACGGTT TGTGCGCCGC AGGCCGCATG GGCCGACCTC GCCCCGGCCG ATCTGGCGGC GGTCCGCGCG CGGCAGGGGG TGCCGCTGGT GGCCGTCGAG GATGTGACGG TGCTTGATCC GGATGGCCGG CCCATCCCTG CCGATGGCCG CACGCTGGGC GAGATCGCCT TTCGCGGCAA CACGGTGATG CTGGGCTATC TGAAGAACCC CGCCGCCACG GCCGAGACGC TGGCGGGCGG GTGGCTGCGC ACCGGCGATC TGGGCGTCCT GCATCCCGAC GGATATGTCG AGGTCAAGGA CCGCGCCAAG GACATCATCA TCTCGGGCGG CGAGAACATC AGCTCGCTCG AGGTCGAGGA GATCCTGTCA CGCCATGCCG CGGTGGTCGA GGCGGCGGTG GTGGCTGAGC CGCACCCGTT CTGGGGCGAG TCCCCGGCCG CCTTCGTGAC GCTTCGCGCC GACGTTCCAG CCCCGACCGG GGCCGATCTT ATTGCCTGGG TGCGTGATCA TCTGGCGCAT TTCAAGGCGC CGCGGCGGGT GGTGTTCCAG GACCTCCCGA AGACCGCGAC CGGCAAGATC CAGAAGGCGA CTCTGCGCGA GGAGGCCCGG CGGATCGCGG CGGTGCAATC GTCGACCTGA
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Protein sequence | MPFPQDRWAG LTPSPATDVP LSPLTFLRRA ARVWPGQVAV IDGDRHFTWA EYADRCRRLA GALTALSVKP GDVVAVLAPN VPLILEAHFG VALAGAVLNP LNTRLDGPGL AFILAHSEAK VLLVDASLAA LAAEALAGLG HPPAVLVAGE GPPPAGLPGA HDYEAALAAA EPAPWRLPDS EWDPIAVNYT SGTTGNPKGV VLHHRGAHLA ALANMAVLGL RSDSRYLWTL PAFHCNGWSG IWAAAAAGTT QVCLPRVDPV AILNRIEEAA ITHLCAAPVV LTMILNIRDG VPERGPGSRP VIIGTGGAAP TSAVLAAAAA RGFDVIHMYG MTESYGPTTV CAPQAAWADL APADLAAVRA RQGVPLVAVE DVTVLDPDGR PIPADGRTLG EIAFRGNTVM LGYLKNPAAT AETLAGGWLR TGDLGVLHPD GYVEVKDRAK DIIISGGENI SSLEVEEILS RHAAVVEAAV VAEPHPFWGE SPAAFVTLRA DVPAPTGADL IAWVRDHLAH FKAPRRVVFQ DLPKTATGKI QKATLREEAR RIAAVQSST
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