Gene Rsph17025_0783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0783 
Symbol 
ID5083474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp798899 
End bp799690 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content67% 
IMG OID640482341 
ProductYaeC family lipoprotein 
Protein accessionYP_001166994 
Protein GI146276835 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen 
TIGRFAM ID[TIGR00363] lipoprotein, YaeC family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGAA ACCTGCTGAC CCGCGCCCTT CTGCTGGGCG CGACCGGAGC CGCCTTGCTC 
GCCCTTCCCG CACTGGCCGA AACCCTTCGG ATCGGGGTGA CGCCGGGGCC GCACGCCCAG
ATCCTCGAGG CGGTGCGCCC GATTGCGGCG CAGAAGGGCC ACCAGATCGA GATCATCGAA
TTCTCGGACT ATGTGGTGCC GAACGAGGCG CTGGCCGCCG GCGAGATCGA GGCAAACAGC
TTCCAGAACC AGCCCTATCT TGACAACCAG ATCCGCGACC GGGGCTATGA CATCGTGCCG
GTGGCGCCGA CAGTGAACTT CCCGCTGGGG ATCTATTCGG CGAAACATGC CGACTGGGCC
AGCCTTCCCG AAGGCGCCAC CATCGCGATC CAGAACGACC CGACCAACGG CGGCCGCTCG
CTTCTGCTGC TGCGCGACCA CGGTGCGATC ACCCTGCGCG AGGGCGTGGG CTTCACCCCC
ACCGTGGCCG ACATCGTCGA CAATCCGAAG AAGCTGAAGA TCCTCGAGAT CGATGCGGCG
CAGACGGCCC GTTCGCTGCC CGACGTGGAT GCGGCGGCCG TCAACACCAA CTATGCCACC
GAAGCCGGGC TGAAGCCGTC GGACGCGATC CTGCGCGAAG ACCCCAAGGG GCCCTATGTC
AACCTGATCG CCGTGCGCAA GGCCGATGCC GGCGCCGCAT GGGTCAAGGA TCTGGTCAGC
GCCTATCACT CGCCCGAGGT GCGCGCCTTC GTCGAAGCCG AATTCGGCGG GTCCGTCCTG
CCGGCCTGGT AA
 
Protein sequence
MSGNLLTRAL LLGATGAALL ALPALAETLR IGVTPGPHAQ ILEAVRPIAA QKGHQIEIIE 
FSDYVVPNEA LAAGEIEANS FQNQPYLDNQ IRDRGYDIVP VAPTVNFPLG IYSAKHADWA
SLPEGATIAI QNDPTNGGRS LLLLRDHGAI TLREGVGFTP TVADIVDNPK KLKILEIDAA
QTARSLPDVD AAAVNTNYAT EAGLKPSDAI LREDPKGPYV NLIAVRKADA GAAWVKDLVS
AYHSPEVRAF VEAEFGGSVL PAW