| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0716 |
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| Symbol | |
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| ID | 5084075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 725871 |
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| End bp | 728480 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640482274 |
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| Product | ribonuclease |
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| Protein accession | YP_001166927 |
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| Protein GI | 146276768 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.198515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.695847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGA AAATGCTTAT CGATGCCACC CACCCGGAGG AGACCCGGGT CGTGGTGGTG
GACGGAAACA AGGTCGAGGA GTTCGACTTC GAGACCGTCA ACAAACGGCA GCTTGCCGGC
AACATCTATC TCGCCAAGGT AACGCGGGTC GAACCTTCGC TTCAGGCGGC CTTCGTCGAT
TACGGCGGCA ACCGGCACGG CTTTCTGGCC TTCGCCGAGA TCCATCCCGA TTATTACCAG
ATCCCGGTGG CCGATCGTAA GGCCCTGATC GAGGAAGAGC GGGCCTACGC CCGCGCCGAG
GAGGATGAGG ATCACGGCCG CTCGCGCCGC AGGTCGCGGC CGGCCCCGGC CGAGGCGCCG
TCGGCGGATG CCGTCCAGTC GGGCGATGTG GGCGGCATGG ATGTGGTCGA TCTCGGTGAA
GAGACCGGCG CCGACGCTCT CTACGAGACC GAGCGCGGGG AGGCCCGGCC CGAGGCGGAC
GAGGCCGAGA AGCCCTGGAA GGCGGTGGAT CACGCCGCCG AGACCGACGA CGAGATCGAA
TCCGTCGCCG ACGAGGATGT GGCCGAGGAG ATCCCGGCCC CGAGGAAGCC CCGCCAGCGC
CGCTACAAGA TCCAGGAAGT GATCAAGGTG CGCCAGATCA TGCTGGTGCA GGTGGTCAAG
GAAGAGCGCG GCAACAAGGG CGCGGCGCTC ACGACCTATC TCAGCCTGGC CGGCCGCTAT
TGCGTGCTGA TGCCGAACAC GGCGCGGGGC GGCGGGATCA GCCGCAAGAT CACCCAGGCC
GCCGACCGCA AGAAGCTGAA GGAAATCGCC TCGGAGCTTG AGGTGCCGGA AGGCGCGGGC
CTCATCATCC GCACCGCCGG CGCCAAGCGC ACCAAGCAGG AGATCCGGCG CGACTACGAA
TATCTCCTTC GCCTGTGGGA GCAGATCCGC GAACTCACGC TGAAGTCGGT CGCCCCGGCG
CCGATCTACG AGGAGGGCGA CCTGATCAAG CGGTCGATCC GCGACCTCTT CAACCGCGAG
ATCGAGGAAG TGCTGGTCGA GGGCGAGACG GGCTACCGCA CCGCCAAGGA CTTCATGCGG
ATGATCATGC CGGCCCACGC CCGGCAGGTG ATCCGCTACG ATGAGCCGAT GCCGCTGTTT
GCGCGCTATC AGGTGGAAAG CTACCTCTCG GGCATGTTCA ACCCGGTGGT GCAGCTGAAA
TCCGGCGGTT ACATCGTCAT CGGCGTGACC GAGGCGCTGG TCGCCATCGA CGTGAACTCC
GGCCGGGCCA CCAAGGAAGG CTCGATCGAG GACACGGCGC TCAAGACCAA CCTCGAGGCC
GCCGAAGAGG TGGCGCGCCA GCTGCGCCTG CGTGACCTTG CCGGGCTGAT CGTCATCGAC
TTCATCGACA TGGAAGAGCG GAAGAACAAC GCCGCCGTCG AGAAGCGCCT GAAGGACAAG
CTGAAGACCG ACCGCGCGCG GATCCAGGTC GGCCGCATCT CGGGCTTCGG CCTGATGGAG
ATGAGCCGCC AGCGCCTGCG TCCGGGGATG CTCGAATCGA CCACGCAGCC CTGCGCGCAT
TGCCACGGCA CCGGCCTGAT CCGCTCGGAC GACAGCCTCG CGCTGCAGGT GCTGCGCCAG
CTGGAAGAAG AGGGCACGCG GAAACGCTCG AAGGAGGTGC TGCTGCGCGC CCCGATCGCG
GTCGTCAACT TCCTGATGAA CCAGAAGCGC GAGCATATCG CGATGATCGA GGCCCGCTAT
GGCATGGCGG TGCGGGTCGA GGCCGATCCT TCGCTGTCCA GCCCGGACTA TGTGATCGAG
AAGTTCAAGA CCGCGACGCG GGTTGTGCCC GAGACGGTCA AGGTGATCTC GGGCAGCGCC
GATCTCATGG GCGCGCCGGT GGACGAGCCC GAGGACGACT GGATCGAGGA GGAGCCCGAG
GTCGAGGAGG CCGAGGAAGC GGTCGAGGCC GCGGAACCTG CCGAGGCCGC TCCCTCTGAA
GGCCAGCCCA AGAAAAAGCG CCGCCGTCGT CGCCGCCGCC GCAATGGCGC GAACGGTGCC
ACGGACCAGA CCGGCGCCGA GGCGGCCGAG AGCGACGAGT CGGACGACTC GGACGAGGAT
GAGGACGAAA CCGCCGACGA GGGCGACGTG CCGGAACCGG CAGCCTTCGT GCCCGAGATG
GCGCCCGAGG CGGTGATCGC GGAACCCGCA GCCGAGCCGG TGGCCGAACC TGTGGCCGAG
CCCGAGGCGG TGGCCGAAGA GCCGCCGGCC CCGCGCAAGC GCACCCGCGT CCGCAAGCCG
AAGGTGGTCG AGGAGAGTGC GGCGGCCCCC GCCGAGGCCG CGCCCGAAGC CGAGCCGAAG
GAGCCGAAGA AGCCCTCCCG GAGCCGCACG AGCCGCAGCC GCAAGAGCGC GGCGGCAGCC
GAGGAAGCCG CTCCTGCGGT CGAGGTGGCG GTGACGGTCG ATGAAGCTCC GGCCGAGGCC
GCGCTCGACG TGGTCGAGAC GCCGGCCGAG CCGGCCCCGG CTGCCCCGCA ACCCGAGGCG
GCCCCCGAGC CCCAGCCCGA GCCGGTCTCG GGCGAGACGG ACGAGGAGAG CAAGCCCAGG
CGCCGCGGCT GGTGGTCGAT CAGCCGCTGA
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| Protein sequence | MAKKMLIDAT HPEETRVVVV DGNKVEEFDF ETVNKRQLAG NIYLAKVTRV EPSLQAAFVD
YGGNRHGFLA FAEIHPDYYQ IPVADRKALI EEERAYARAE EDEDHGRSRR RSRPAPAEAP
SADAVQSGDV GGMDVVDLGE ETGADALYET ERGEARPEAD EAEKPWKAVD HAAETDDEIE
SVADEDVAEE IPAPRKPRQR RYKIQEVIKV RQIMLVQVVK EERGNKGAAL TTYLSLAGRY
CVLMPNTARG GGISRKITQA ADRKKLKEIA SELEVPEGAG LIIRTAGAKR TKQEIRRDYE
YLLRLWEQIR ELTLKSVAPA PIYEEGDLIK RSIRDLFNRE IEEVLVEGET GYRTAKDFMR
MIMPAHARQV IRYDEPMPLF ARYQVESYLS GMFNPVVQLK SGGYIVIGVT EALVAIDVNS
GRATKEGSIE DTALKTNLEA AEEVARQLRL RDLAGLIVID FIDMEERKNN AAVEKRLKDK
LKTDRARIQV GRISGFGLME MSRQRLRPGM LESTTQPCAH CHGTGLIRSD DSLALQVLRQ
LEEEGTRKRS KEVLLRAPIA VVNFLMNQKR EHIAMIEARY GMAVRVEADP SLSSPDYVIE
KFKTATRVVP ETVKVISGSA DLMGAPVDEP EDDWIEEEPE VEEAEEAVEA AEPAEAAPSE
GQPKKKRRRR RRRRNGANGA TDQTGAEAAE SDESDDSDED EDETADEGDV PEPAAFVPEM
APEAVIAEPA AEPVAEPVAE PEAVAEEPPA PRKRTRVRKP KVVEESAAAP AEAAPEAEPK
EPKKPSRSRT SRSRKSAAAA EEAAPAVEVA VTVDEAPAEA ALDVVETPAE PAPAAPQPEA
APEPQPEPVS GETDEESKPR RRGWWSISR
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